Suppr超能文献

类器官与CRISPR筛选技术的整合:一篇综述

Integration of Organoids With CRISPR Screens: A Narrative Review.

作者信息

Mukhare Rushikesh, Gandhi Khushboo A, Kadam Anushree, Raja Aishwarya, Singh Ankita, Madhav Mrudula, Chaubal Rohan, Pandey Shwetali, Gupta Sudeep

机构信息

Clinical Genomics and Hypoxia Lab (Clinician Scientist Laboratory), Advanced Centre for Treatment, Research, and Education in Cancer, Tata Memorial Centre, Navi Mumbai, Maharashtra, India.

Training School Complex, Homi Bhabha National Institute, Mumbai, Maharashtra, India.

出版信息

Biol Cell. 2025 Apr;117(4):e70006. doi: 10.1111/boc.70006.

Abstract

Organoids represent a significant advancement in disease modeling, demonstrated by their capacity to mimic the physiological/pathological structure and functional characteristics of the native tissue. Recently CRISPR/Cas9 technology has emerged as a powerful tool in combination with organoids for the development of novel therapies in preclinical settings. This review explores the current literature on applications of pooled CRISPR screening in organoids and the emerging role of these models in understanding cancer. We highlight the evolution of genome-wide CRISPR gRNA library screens in organoids, noting their increasing adoption in the field over the past decade. Noteworthy studies utilizing these screens to investigate oncogenic vulnerabilities and developmental pathways in various organoid systems are discussed. Despite the promise organoids hold, challenges such as standardization, reproducibility, and the complexity of data interpretation remain. The review also addresses the ideas of assessing tumor organoids (tumoroids) against established cancer hallmarks and the potential of studying intercellular cooperation within these models. Ultimately, we propose that organoids, particularly when personalized for patient-specific applications, could revolutionize drug screening and therapeutic approaches, minimizing the reliance on traditional animal models and enhancing the precision of clinical interventions.

摘要

类器官代表了疾病建模领域的一项重大进展,其能够模拟天然组织的生理/病理结构及功能特征,已证明了这一点。最近,CRISPR/Cas9技术已成为一种强大的工具,可与类器官相结合,用于临床前环境中新型疗法的开发。本综述探讨了关于在类器官中进行CRISPR筛选池应用的当前文献,以及这些模型在理解癌症方面的新作用。我们强调了类器官中全基因组CRISPR gRNA文库筛选的发展历程,注意到在过去十年中它们在该领域的应用日益增多。讨论了利用这些筛选来研究各种类器官系统中致癌易感性和发育途径的重要研究。尽管类器官前景广阔,但仍存在标准化、可重复性和数据解释复杂性等挑战。本综述还探讨了根据既定癌症特征评估肿瘤类器官(肿瘤样体)的思路,以及在这些模型中研究细胞间合作的潜力。最终,我们提出类器官,特别是针对患者特异性应用进行个性化定制时,可能会彻底改变药物筛选和治疗方法,减少对传统动物模型的依赖,并提高临床干预的精准度。

相似文献

1
Integration of Organoids With CRISPR Screens: A Narrative Review.
Biol Cell. 2025 Apr;117(4):e70006. doi: 10.1111/boc.70006.
2
Human Organoids as an Emerging Tool for Genome Screenings.
Annu Rev Biomed Eng. 2025 May;27(1):157-183. doi: 10.1146/annurev-bioeng-103023-122327.
3
Genome-scale CRISPR pooled screens.
Anal Biochem. 2017 Sep 1;532:95-99. doi: 10.1016/j.ab.2016.05.014. Epub 2016 Jun 1.
4
CRISPR/Cas 9 genome editing and its applications in organoids.
Am J Physiol Gastrointest Liver Physiol. 2017 Mar 1;312(3):G257-G265. doi: 10.1152/ajpgi.00410.2016. Epub 2017 Jan 26.
5
CRISPR-Based Gene Therapies: From Preclinical to Clinical Treatments.
Cells. 2024 May 8;13(10):800. doi: 10.3390/cells13100800.
6
Critical cancer vulnerabilities identified by unbiased CRISPR/Cas9 screens inform on efficient cancer Immunotherapy.
Eur J Immunol. 2020 Dec;50(12):1871-1884. doi: 10.1002/eji.202048712. Epub 2020 Dec 1.
7
New tools for old drugs: Functional genetic screens to optimize current chemotherapy.
Drug Resist Updat. 2018 Jan;36:30-46. doi: 10.1016/j.drup.2018.01.001. Epub 2018 Jan 12.
8
CRISPR-Cas9 for cancer therapy: Opportunities and challenges.
Cancer Lett. 2019 Apr 10;447:48-55. doi: 10.1016/j.canlet.2019.01.017. Epub 2019 Jan 23.
9
Efficient genetic editing of human intestinal organoids using ribonucleoprotein-based CRISPR.
Dis Model Mech. 2023 Oct 1;16(10). doi: 10.1242/dmm.050279. Epub 2023 Oct 5.
10
CRISPR-Cas Tools and Their Application in Genetic Engineering of Human Stem Cells and Organoids.
Cell Stem Cell. 2020 Nov 5;27(5):705-731. doi: 10.1016/j.stem.2020.10.014.

本文引用的文献

1
In Search of Representative Translational Cancer Model Systems.
Cancer Res. 2025 Feb 1;85(3):407-409. doi: 10.1158/0008-5472.CAN-24-3879.
2
A benchmarked, high-efficiency prime editing platform for multiplexed dropout screening.
Nat Methods. 2025 Jan;22(1):92-101. doi: 10.1038/s41592-024-02502-4. Epub 2024 Nov 19.
3
Tumour evolution and microenvironment interactions in 2D and 3D space.
Nature. 2024 Oct;634(8036):1178-1186. doi: 10.1038/s41586-024-08087-4. Epub 2024 Oct 30.
4
Patient-derived mini-colons enable long-term modeling of tumor-microenvironment complexity.
Nat Biotechnol. 2025 May;43(5):727-736. doi: 10.1038/s41587-024-02301-4. Epub 2024 Jul 2.
5
Patient-derived tumor organoids: a new avenue for preclinical research and precision medicine in oncology.
Exp Mol Med. 2024 Jul;56(7):1531-1551. doi: 10.1038/s12276-024-01272-5. Epub 2024 Jul 1.
7
Establishment of patient-derived organoids for guiding personalized therapies in breast cancer patients.
Int J Cancer. 2024 Jul 15;155(2):324-338. doi: 10.1002/ijc.34931. Epub 2024 Mar 27.
8
Uncovering the bookshelves of CRISPR-based libraries: Advances and applications in cancer studies.
Crit Rev Oncol Hematol. 2024 Apr;196:104287. doi: 10.1016/j.critrevonc.2024.104287. Epub 2024 Feb 10.
10
Murine trophoblast organoids as a model for trophoblast development and CRISPR-Cas9 screening.
Dev Cell. 2023 Dec 18;58(24):2992-3008.e7. doi: 10.1016/j.devcel.2023.11.007. Epub 2023 Dec 5.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验