Ivanisenko Nikita V, König Corinna, Hillert-Richter Laura K, Feoktistova Maria A, Pietkiewicz Sabine, Richter Max, Panayotova-Dimitrova Diana, Kaehne Thilo, Lavrik Inna N
Translational Inflammation Research, Medical Faculty, Otto von Guericke University, Magdeburg, Germany.
Department of Dermatology and Allergology, University Hospital RWTH Aachen, Aachen, Germany.
EMBO J. 2025 Apr 16. doi: 10.1038/s44318-025-00433-0.
The necrosome is the key macromolecular signaling platform initiating necroptosis, i.e., a RIPK1/RIPK3-dependent program of cell death with an important role in the control of inflammation in multicellular organisms. However, the composition and structure of the necrosome remain incompletely understood. Here we use biochemical assays, quantitative mass spectrometry, and AlphaFold modeling to decipher the composition and derive a structural model of the CD95L/BV6-induced necrosome. We identify RIPK1 as the central component of the necrosome, forming the core of this complex. In addition, AlphaFold modeling provides insights into the structural mechanisms underlying RIPK1 oligomerization, highlighting the critical role of type-II interactions between the Death Domains (DDs) of FADD and RIPK1 in the assembly of RIPK1-mediated complexes. The role of type-II DD interactions in necroptosis induction is further validated through structure-guided site-directed mutagenesis. Our findings could be useful for the pharmacological targeting of the necroptosis network to treat diseases associated with dysregulated cell death and inflammation.
坏死小体是启动坏死性凋亡的关键大分子信号平台,即一种依赖受体相互作用蛋白激酶1(RIPK1)/受体相互作用蛋白激酶3(RIPK3)的细胞死亡程序,在多细胞生物体的炎症控制中起重要作用。然而,坏死小体的组成和结构仍未完全明确。在此,我们运用生化分析、定量质谱和AlphaFold建模来解析CD95L/BV6诱导的坏死小体的组成并推导其结构模型。我们确定RIPK1是坏死小体的核心成分,构成了该复合物的核心。此外,AlphaFold建模为RIPK1寡聚化的潜在结构机制提供了见解,突出了FADD和RIPK1的死亡结构域(DDs)之间II型相互作用在RIPK1介导的复合物组装中的关键作用。通过基于结构的定点诱变进一步验证了II型DD相互作用在坏死性凋亡诱导中的作用。我们的研究结果可能有助于对坏死性凋亡网络进行药理学靶向治疗与细胞死亡和炎症失调相关的疾病。