González-López Adrián, Ge Xueliang, Larsson Daniel S D, Sihlbom Wallem Carina, Sanyal Suparna, Selmer Maria
Department of Cell and Molecular Biology, Uppsala University, BMC, Uppsala, Sweden.
Uppsala Antibiotic Center, Uppsala University, Uppsala, Sweden.
Nat Commun. 2025 Apr 18;16(1):3693. doi: 10.1038/s41467-025-58902-3.
The antibiotic resistance protein FusB rescues protein synthesis from inhibition by fusidic acid (FA), which locks elongation factor G (EF-G) to the ribosome after GTP hydrolysis. Here, we present time-resolved single-particle cryo-EM structures explaining the mechanism of FusB-mediated rescue. FusB binds to the FA-trapped EF-G on the ribosome, causing large-scale conformational changes of EF-G that break interactions with the ribosome, tRNA, and mRNA. This leads to dissociation of EF-G from the ribosome, followed by FA release. We also observe two independent binding sites of FusB on the classical-state ribosome, overlapping with the binding site of EF-G to each of the ribosomal subunits, yet not inhibiting tRNA delivery. The affinity of FusB to the ribosome and the concentration of FusB in S. aureus during FusB-mediated resistance support that direct binding of FusB to ribosomes could occur in the cell. Our results reveal an intricate resistance mechanism involving specific interactions of FusB with both EF-G and the ribosome, and a non-canonical release pathway of EF-G.
抗生素抗性蛋白FusB可使蛋白质合成免受夫西地酸(FA)抑制,夫西地酸在GTP水解后将延伸因子G(EF-G)锁定在核糖体上。在此,我们展示了时间分辨单颗粒冷冻电镜结构,解释了FusB介导的拯救机制。FusB与核糖体上被FA捕获的EF-G结合,导致EF-G发生大规模构象变化,破坏其与核糖体、tRNA和mRNA的相互作用。这导致EF-G从核糖体上解离,随后FA释放。我们还观察到FusB在经典状态核糖体上有两个独立的结合位点,与EF-G与每个核糖体亚基的结合位点重叠,但不抑制tRNA的递送。FusB与核糖体的亲和力以及在FusB介导的抗性过程中金黄色葡萄球菌中FusB的浓度表明,FusB与核糖体的直接结合可能在细胞中发生。我们的结果揭示了一种复杂的抗性机制,涉及FusB与EF-G和核糖体的特异性相互作用,以及EF-G的非经典释放途径。