Basak Mridushree, Chakraborty Sukanya, Kundu Sutrisha, Dey Sonali, Das Malay
Plant Genomics Laboratory, Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata, West Bengal 700073 India.
Department of Botany, Scottish Church College, 1 & 3, Urquhart Square, Manicktala, Azad Hind Bag, Kolkata, West Bengal 700006 India.
Physiol Mol Biol Plants. 2025 Mar;31(3):389-404. doi: 10.1007/s12298-025-01569-3. Epub 2025 Mar 13.
Bamboos belong to the grass family Poaceae, sub-family Bambusoideae and possess many interesting developmental features including a long vegetative period before flowering. Previously, transcriptome based analyses have identified differentially expressed transcripts in flowering and vegetative tissues to predict gene clusters of functional relevance. In contrast, limited studies were conducted to characterize individual genes to decipher their precise role to induce flowering. This was primarily due to the unavailability of sufficient genomic resources, which has lately been overcome by the release of additional bamboo genomes. In this study, the gene homologs (, , and ) have been identified from five sequenced bamboo species (, , , , ). In addition, homologs from a tropical bamboo () have been PCR amplified, sequenced and included in the analyses to widen spectrum of sampling. Assessment of their phylogenetic and syntenic relationship with related Poaceae neighbours revealed closer relationship between and members than and . Transcriptional expression patterns of , , and in vegetative and floral tissues indicated a possible role of and in flower induction and differentiation, while might be associated with seed development. Total 24 proteins were predicted to interact with the homolog of BtMADS14 protein and 8 of them were members of the MADS-box family. The overexpressing Arabidopsis plants flowered 8-10 days earlier than the wild type plants suggesting its possible involvement in the floral induction of .
The online version contains supplementary material available at 10.1007/s12298-025-01569-3.
竹子属于禾本科竹亚科,具有许多有趣的发育特征,包括开花前较长的营养生长期。此前,基于转录组的分析已在开花和营养组织中鉴定出差异表达的转录本,以预测功能相关的基因簇。相比之下,为了解析单个基因在诱导开花中的确切作用而进行的研究较少。这主要是由于缺乏足够的基因组资源,不过最近随着更多竹子基因组的发布,这一问题已得到解决。在本研究中,已从五个已测序的竹种(、、、、)中鉴定出基因同源物(、、和)。此外,还通过PCR扩增、测序并纳入分析了一种热带竹子()的同源物,以拓宽采样范围。对它们与相关禾本科近缘物种的系统发育和共线性关系评估表明,与成员之间的关系比与的关系更密切。、、和在营养组织和花组织中的转录表达模式表明,和可能在花的诱导和分化中起作用,而可能与种子发育有关。预计共有24种蛋白质与BtMADS14蛋白的同源物相互作用,其中8种是MADS盒家族的成员。过表达的拟南芥植株比野生型植株早8 - 10天开花,表明其可能参与了的花诱导过程。
在线版本包含可在10.1007/s12298-025-01569-3获取的补充材料。