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已灭绝的加州棕熊的基因组数据为重新引入加州提供了一个源种群。

Genomic data from the extinct California brown bear suggests a source population for reintroduction to California.

作者信息

Wooldridge T Brock, Wang Ming-Shan, Saremi Nedda F, Kapp Joshua D, Moon Katherine L, Heintzman Peter D, Dumbacher John P, Alagona Peter S, Long Barney, Shapiro Beth

机构信息

Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA, United States.

Key Laboratory of Genetic Evolution & Animal Models, State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, KunmingChina.

出版信息

J Hered. 2025 Jul 21;116(4):422-434. doi: 10.1093/jhered/esaf018.

Abstract

California brown bears, also known as California grizzlies or golden bears, are an extinct group that once thrived in North America's western coastal habitats. Despite being common in the region as recently as the early 19th century, intense poisoning, trapping, and hunting led to their extinction by 1924. Today, California is emerging as a candidate for brown bear reintroduction as a component of larger ecosystem restoration efforts. Questions remain, however, about whether living brown bears are suitable proxies for the bears that once inhabited California. While recent work suggests that brown bears from California were similar in size and overall diet to brown bears living today in continental North America, the 1) extent to which California bears were genetically differentiated from other populations, and 2) what this means for proposed reintroductions, remain outstanding questions. We generated genomes from two of the last living California brown bears and compared them to genomes from living brown bears. Genomic estimates of divergence time combined with radiocarbon dating points towards brown bears arriving recently in California, having diverged within the last 10,000 years from a common ancestor with brown bears found today in Yellowstone National Park, Wyoming. This timeline, the overall genetic similarity between the California and Yellowstone populations, and the strong pattern of isolation-by-distance we observe all suggest that no closer living relatives are likely to be found. If genetic background is to be a consideration for reintroduction efforts in California, brown bears from Yellowstone might serve as a source population.

摘要

加利福尼亚棕熊,也被称为加利福尼亚灰熊或金熊,是一个已灭绝的种群,曾经在北美西部沿海栖息地繁衍生息。尽管在19世纪初该地区还很常见,但高强度的毒杀、诱捕和狩猎导致它们在1924年灭绝。如今,作为更大规模生态系统恢复工作的一部分,加利福尼亚正成为重新引入棕熊的候选地。然而,关于现存的棕熊是否适合作为曾经栖息在加利福尼亚的棕熊的替代者,仍存在疑问。虽然最近的研究表明,加利福尼亚的棕熊在体型和总体饮食上与如今生活在北美大陆的棕熊相似,但1)加利福尼亚棕熊与其他种群在基因上的分化程度,以及2)这对拟议的重新引入意味着什么,仍是悬而未决的问题。我们从最后两只存活的加利福尼亚棕熊身上提取了基因组,并将它们与现存棕熊的基因组进行了比较。基因组分歧时间估计结合放射性碳年代测定表明,棕熊是最近才抵达加利福尼亚的,在过去1万年内从与如今怀俄明州黄石国家公园发现的棕熊的共同祖先分化而来。这个时间线、加利福尼亚和黄石种群之间总体的基因相似性,以及我们观察到的强烈的距离隔离模式都表明,不太可能找到更近的现存亲属。如果基因背景要作为加利福尼亚重新引入工作的一个考虑因素,来自黄石的棕熊可能作为一个源种群。

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