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转录组分析表明细胞壁调控途径参与了菌丝体对不同热胁迫的耐受性。

Transcriptome Analysis Revealed That Cell Wall Regulatory Pathways Are Involved in the Tolerance of Mycelia to Different Heat Stresses.

作者信息

Hou Ludan, Wang Jingyi, Li Tonglou, Zhang Baosheng, Yan Kexing, Zhang Zehua, Geng Xueran, Chang Mingchang, Meng Junlong

机构信息

College of Food Science and Engineering, Shanxi Agricultural University, Taigu, Jinzhong 030801, China.

Shanxi Key Laboratory of Edible Fungi for Loess Plateau, Taigu, Jinzhong 030801, China.

出版信息

J Fungi (Basel). 2025 Mar 30;11(4):266. doi: 10.3390/jof11040266.

Abstract

is the third largest cultivated species in China's edible mushroom industry; however, its agricultural cultivation method is easily affected by high-temperature environments. To understand the response mechanism of mycelia to heat stress, the mycelia of , which had been grown at 28 °C for 4 days, were subjected to heat stress at 32 °C and 36 °C for 2 days, followed by RNA-seq analysis. These results indicate that, under heat stress, mycelial growth was significantly inhibited, the cell membrane was disrupted, the cell walls became thicker, and chitinase and β-1,3-glucanase activities decreased. Transcriptome analysis revealed 2118 differentially expressed genes (DEGs) under 36 °C heat stress, and 458 DEGs were identified under 32 °C heat stress. A total of 328 DEGs were upregulated or downregulated under heat stress at 36 °C and 32 °C. The functional enrichment analysis of these genes revealed significant enrichment in genes related to hydrogen peroxide metabolism, oxidoreductase activity, ATP hydrolysis, and cell wall structure composition. There was a total of 80 DEGs specific to heat stress at 32 °C, and they were significantly enriched in catalase activity, the cell wall, the aminoglycan catabolic process, and oxidoreductase activity. However, 817 DEGs specific to heat stress at 36 °C were significantly enriched in the cell wall, integral components of the membrane, and oxidoreductase activity. The identification of cell wall-related genes revealed that hydrophobic proteins, Cerato plateau proteins, laccases, and glycoside hydrolases may respond to stress. The results of qRT-PCR for cell wall-related genes are consistent with the RNA-seq data. This study revealed several potential candidate genes for high-temperature thermal response, laying the foundation for the study of the thermal response mechanism of .

摘要

是中国食用菌产业中第三大栽培品种;然而,其农业栽培方式容易受到高温环境的影响。为了解菌丝体对热胁迫的响应机制,将在28℃下培养4天的的菌丝体在32℃和36℃下进行2天的热胁迫处理,然后进行RNA测序分析。这些结果表明,在热胁迫下,菌丝体生长受到显著抑制,细胞膜被破坏,细胞壁变厚,几丁质酶和β-1,3-葡聚糖酶活性降低。转录组分析显示,在36℃热胁迫下有2118个差异表达基因(DEGs),在32℃热胁迫下鉴定出458个DEGs。共有328个DEGs在36℃和32℃热胁迫下上调或下调。这些基因的功能富集分析表明,与过氧化氢代谢、氧化还原酶活性、ATP水解和细胞壁结构组成相关的基因显著富集。在32℃热胁迫下共有80个DEGs是特异性的,它们在过氧化氢酶活性、细胞壁、氨基聚糖分解代谢过程和氧化还原酶活性方面显著富集。然而,在36℃热胁迫下特异性的817个DEGs在细胞壁、膜的整体成分和氧化还原酶活性方面显著富集。细胞壁相关基因的鉴定表明,疏水蛋白、角质高原蛋白、漆酶和糖苷水解酶可能对胁迫作出反应。细胞壁相关基因的qRT-PCR结果与RNA测序数据一致。本研究揭示了几个高温热响应的潜在候选基因,为的热响应机制研究奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d19d/12028245/cd80f49c5b73/jof-11-00266-g001.jpg

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