Li Mingwan, Zou Jun, Cheng Qian, Fu Ran, Zhang Dangquan, Lai Yong, Chen Yuanyuan, Yang Chaochen, Hu Wentao, Ding Shen
College of Forestry, Henan Agricultural University, Zhengzhou 450046, China.
College of Horticulture and Forestry Science, Hubei Engineering Technology Research Center for Forestry Information, Huazhong Agricultural University, Wuhan 430070, China.
Life (Basel). 2025 Mar 27;15(4):550. doi: 10.3390/life15040550.
The ethylene response factor (ERF) family is a prominent plant-specific transcription factor family, which plays a crucial role in modulating plant growth and stress tolerance. In this study, a total of 210 were identified in , comprising 29 AP2 (APETALA2) subfamily members, 176 ERF subfamily members, and 5 RAV (related to ABI3/VP1) subfamily members. The duplication events of the family members exclusively occurred within the subfamilies. A total of 168 duplication pairs were found among 161 genes, and all of them were fragment duplications. Gene structure analysis revealed that most ERF subfamily members only had one exon without introns, the AP2 subfamily members had six or more introns and exons, and RAV subfamily members lacked introns except for . Considerable cis-acting elements associated with plant growth and development, stress response, hormone response, and light response were detected in the promoters of genes. The expression levels of were highest in roots across tissues and in winter among seasons. Furthermore, the nitrate and urea stimulated the expression of genes. The co-expression network analysis based on indicated their potential roles in hormone signaling, acyltransferase activity, and response to chemicals. This study provides novel insights into investigating the role of in environmental stress in poplar species.
乙烯响应因子(ERF)家族是一个重要的植物特异性转录因子家族,在调节植物生长和胁迫耐受性方面发挥着关键作用。在本研究中,共在[具体物种]中鉴定出210个[ERF家族成员],其中包括29个AP2(APETALA2)亚家族成员、176个ERF亚家族成员和5个RAV(与ABI3/VP1相关)亚家族成员。[ERF家族成员的]复制事件仅发生在亚家族内部。在161个[ERF家族]基因中总共发现了168个复制对,并且它们均为片段重复。基因结构分析表明,大多数ERF亚家族成员只有一个外显子,没有内含子,AP2亚家族成员有六个或更多的内含子和外显子,而RAV亚家族成员除了[某个特定成员]外均缺乏内含子。在[ERF家族]基因的启动子中检测到了大量与植物生长发育、胁迫响应、激素响应和光响应相关的顺式作用元件。[ERF家族成员的]表达水平在各组织的根中最高,在各季节中冬季最高。此外,硝酸盐和尿素刺激了[ERF家族]基因的表达。基于[相关数据]的共表达网络分析表明它们在激素信号传导、酰基转移酶活性和对化学物质的响应中具有潜在作用。本研究为研究[ERF家族]在杨树物种环境胁迫中的作用提供了新的见解。