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逆转录酶1(NbRZ1)基因组位点的表达

Expression of the Retrozyme 1 (NbRZ1) Genomic Locus.

作者信息

Lezzhov Alexander A, Atabekova Anastasia K, Chergintsev Denis A, Solovyev Andrey G, Morozov Sergey Y

机构信息

A. N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, 119992 Moscow, Russia.

出版信息

Plants (Basel). 2025 Apr 14;14(8):1205. doi: 10.3390/plants14081205.

DOI:10.3390/plants14081205
PMID:40284093
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12029980/
Abstract

Retrozymes are a class of non-autonomous plant retrotransposons that have long terminal repeats (LTRs) containing hammerhead ribozymes (HHRs) that facilitate the circularization of the retrozyme RNA. The LTR of retrozyme 1 (NbRZ1) has been shown to contain a promoter that directs transcription of this retroelement. In this study, we identified the transcription start site of the promoter contained in the LTR of NbRZ1 and mapped the promoter region essential for its transcriptional activity. Using transgenic plants carrying the GUS gene under the control of the NbRZ1 LTR, the NbRZ1 transcript was demonstrated to potentially encode a protein targeted for proteasomal degradation in the plant cell. Overexpression of this protein in plants using a viral expression vector was found to cause severe necrosis. The data presented suggest a tight regulation of the expression of the NbRZ1-encoded polypeptide in plants and its potential functional importance, although further research is needed to determine whether circular and/or linear retrozyme RNA forms can be translated in plants.

摘要

逆转录酶是一类非自主植物逆转录转座子,其具有长末端重复序列(LTRs),这些长末端重复序列包含锤头状核酶(HHRs),可促进逆转录酶RNA的环化。逆转录酶1(NbRZ1)的LTR已被证明含有一个启动子,该启动子指导这种逆转录元件的转录。在本研究中,我们确定了NbRZ1的LTR中所含启动子的转录起始位点,并绘制了其转录活性所必需的启动子区域。使用在NbRZ1 LTR控制下携带GUS基因的转基因植物,证明NbRZ1转录本可能编码一种在植物细胞中靶向蛋白酶体降解的蛋白质。使用病毒表达载体在植物中过表达这种蛋白质会导致严重坏死。所呈现的数据表明植物中NbRZ1编码的多肽表达受到严格调控及其潜在的功能重要性,尽管还需要进一步研究来确定环状和/或线性逆转录酶RNA形式是否能在植物中翻译。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d60a/12029980/5106943bbc70/plants-14-01205-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d60a/12029980/61700ea479f0/plants-14-01205-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d60a/12029980/5106943bbc70/plants-14-01205-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d60a/12029980/61700ea479f0/plants-14-01205-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d60a/12029980/5106943bbc70/plants-14-01205-g002.jpg

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本文引用的文献

1
Viroids and Retrozymes: Plant Circular RNAs Capable of Autonomous Replication.类病毒与逆转录酶:能够自主复制的植物环状RNA
Plants (Basel). 2024 Dec 27;14(1):61. doi: 10.3390/plants14010061.
2
MBD2 couples DNA methylation to transposable element silencing during male gametogenesis.MBD2 将 DNA 甲基化与雄性配子发生过程中的转座元件沉默相耦合。
Nat Plants. 2024 Jan;10(1):13-24. doi: 10.1038/s41477-023-01599-3. Epub 2024 Jan 15.
3
In-Plant Persistence and Systemic Transport of Retrozyme RNA.在植物体内的持久性和 Retrozyme RNA 的系统转运。
Int J Mol Sci. 2022 Nov 11;23(22):13890. doi: 10.3390/ijms232213890.
4
Identification, biogenesis, function, and mechanism of action of circular RNAs in plants.环状 RNA 在植物中的鉴定、生物发生、功能和作用机制。
Plant Commun. 2023 Jan 9;4(1):100430. doi: 10.1016/j.xplc.2022.100430. Epub 2022 Sep 7.
5
Engineering circular RNA for enhanced protein production.工程环状 RNA 以提高蛋白质产量。
Nat Biotechnol. 2023 Feb;41(2):262-272. doi: 10.1038/s41587-022-01393-0. Epub 2022 Jul 18.
6
Pervasive translation of circular RNAs driven by short IRES-like elements.由短的 IRES 样元件驱动的环状 RNA 的普遍翻译。
Nat Commun. 2022 Jun 29;13(1):3751. doi: 10.1038/s41467-022-31327-y.
7
Mitochondrion-encoded circular RNAs are widespread and translatable in plants.线粒体编码的环状 RNAs 在植物中广泛存在且具有翻译活性。
Plant Physiol. 2022 Jun 27;189(3):1482-1500. doi: 10.1093/plphys/kiac143.
8
Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress.长末端重复序列 (LTR) 和转录因子调节热胁迫下毛竹 PHRE1 和 PHRE2 的活性。
BMC Plant Biol. 2021 Dec 9;21(1):585. doi: 10.1186/s12870-021-03339-1.
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MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO.MBD5和MBD6通过J结构域蛋白SILENZIO将DNA甲基化与基因沉默联系起来。
Science. 2021 Jun 3. doi: 10.1126/science.abg6130.
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An Insulin-Sensitive Circular RNA that Regulates Lifespan in Drosophila.一种胰岛素敏感的环状 RNA,调控果蝇寿命。
Mol Cell. 2020 Jul 16;79(2):268-279.e5. doi: 10.1016/j.molcel.2020.06.011. Epub 2020 Jun 26.