Suppr超能文献

高质量基因组组装与转录组为其进化和热应激反应提供见解。

High-Quality Genome Assembly and Transcriptome of Provide Insights into Its Evolution and Heat Stress Response.

作者信息

Wang Zizhuo, Qin Kunrong, Chen Wentao, Ma Guanpeng, Zhan Yu, Zhu Haoxiang, Wang Haiyang

机构信息

College of Horticulture and Landscape Architecture, Southwest University, Chongqing 400715, China.

School of Architecture and Design, Chongqing College of Humanities, Science & Technology, Chongqing 401524, China.

出版信息

Plants (Basel). 2025 Apr 17;14(8):1233. doi: 10.3390/plants14081233.

Abstract

() is an endangered alpine species with a highly restricted distribution in the southwestern region of China, which possesses significant ornamental and horticultural value. In this study, the high-quality genome assembly of at the chromosomal level is reported. The total genome size was determined to be 642.25 Mb, with a contig N50 of 25.64 Mb, and it contains 36,522 predicted genes. Comparative genomic analysis between and other species revealed the expansion of gene families, such as those related to transition metal ion binding and sodium ion transport, as well as the contraction of gene families involved in the recognition of pollen and pollen-pistil interaction. These findings might explain the adaptation of to rocky habitats and contribute to its endangered status. Furthermore, a heat stress experiment was conducted on , followed by transcriptome sequencing and physiological co-analysis to construct a co-expression network. This analysis identified the candidate gene and other transcription factors exhibiting differential expression under heat stress. The whole-genome sequencing, transcriptome analysis, and physiological co-analysis of provide valuable resources for its conservation and offer insights into its mechanisms of heat stress.

摘要

()是一种濒危高山物种,在中国西南地区分布极为有限,具有重要的观赏和园艺价值。在本研究中,报道了()在染色体水平上的高质量基因组组装。确定其基因组总大小为642.25 Mb,重叠群N50为25.64 Mb,包含36,522个预测基因。()与其他物种之间的比较基因组分析揭示了基因家族的扩张,如与过渡金属离子结合和钠离子转运相关的基因家族,以及参与花粉识别和花粉 - 雌蕊相互作用的基因家族的收缩。这些发现可能解释了()对岩石栖息地的适应性,并导致其濒危状态。此外,对()进行了热应激实验,随后进行转录组测序和生理共分析以构建共表达网络。该分析确定了候选基因()和其他在热应激下表现出差异表达的转录因子。()的全基因组测序、转录组分析和生理共分析为其保护提供了有价值的资源,并为其热应激机制提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d890/12030086/f9eec4792670/plants-14-01233-g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验