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巴西圭亚那海豚麻疹病毒(GDMV)的全基因组测序

Complete Genome Sequencing of the Divergent Guiana Dolphin Morbillivirus (GDMV), Brazil.

作者信息

Groch Kátia Regina, Miyagi Sueli Akemi Taniwaki, Díaz-Delgado Josué, Santos-Neto Elitieri B, Lailson-Brito José, Brandão Paulo Eduardo, Catão-Dias José Luiz

机构信息

Department of Pathology, School of Veterinary Medicine and Animal Sciences, University of São Paulo, São Paulo 05508-207, Brazil.

Department of Preventive Veterinary Medicine and Animal Health, School of Veterinary Medicine and Animal Sciences, University of São Paulo, São Paulo 05508-207, Brazil.

出版信息

Viruses. 2025 Apr 18;17(4):582. doi: 10.3390/v17040582.

DOI:10.3390/v17040582
PMID:40285024
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12031208/
Abstract

Cetacean morbillivirus (CeMV) is a major threat to cetaceans worldwide, causing individual deaths and outbreaks of mass mortality. Based on partial sequences of the viral phosphoprotein, CeMV is subclassified into seven strains and two distinct lineages. To date, only CeMV-1 strains, including the dolphin morbillivirus (DMV), have been completely sequenced. The CeMV-2 lineage was first reported in Guiana dolphins () in Brazil and was associated with an unusual mortality event in 2017-2018. Here we provide the nearly complete Guiana dolphin morbillivirus (GDMV) genome sequence, representing the first within the CeMV-2 lineage. GDMV was isolated using Vero.DogSLAMtag cells, the viral RNA was extracted, and deep sequencing analysis was performed. Gaps in the viral genome were completed by Sanger sequencing. The final genome length was 15,607 nucleotides covering 99.3% of the DMV reference genome, including full sequences of the six structural proteins encoded by morbillivirus. The sequence similarity was 74-77.9% to other CeMV strains, with highest identity to the DMV. The complete L protein amino acid sequence comparison-based taxonomy indicates that GDMV is a distinct morbillivirus species; however, as GDMV and CeMV-1 strains infect a similar host spectrum, our findings support that GDMV represents a new CeMV-2 lineage.

摘要

鲸目动物麻疹病毒(CeMV)是全球鲸目动物面临的主要威胁,可导致个体死亡和大规模死亡疫情。根据病毒磷蛋白的部分序列,CeMV被细分为七个毒株和两个不同的谱系。迄今为止,只有包括海豚麻疹病毒(DMV)在内的CeMV-1毒株已被完全测序。CeMV-2谱系首次在巴西的圭亚那海豚中被报道,并与2017 - 2018年的一次异常死亡事件有关。在此,我们提供了近乎完整的圭亚那海豚麻疹病毒(GDMV)基因组序列,这是CeMV-2谱系中的首个序列。使用Vero.DogSLAMtag细胞分离出GDMV,提取病毒RNA,并进行深度测序分析。病毒基因组中的缺口通过桑格测序完成。最终基因组长度为15607个核苷酸,覆盖了DMV参考基因组的99.3%,包括麻疹病毒编码的六种结构蛋白的完整序列。与其他CeMV毒株的序列相似性为74 - 77.9%,与DMV的同一性最高。基于完整L蛋白氨基酸序列比较的分类学表明,GDMV是一种独特的麻疹病毒物种;然而,由于GDMV和CeMV-1毒株感染相似的宿主谱,我们的研究结果支持GDMV代表一个新的CeMV-2谱系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d273/12031208/1c38a66473f2/viruses-17-00582-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d273/12031208/053593cb8848/viruses-17-00582-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d273/12031208/ceb0ac380e6a/viruses-17-00582-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d273/12031208/9455b6bf4b8c/viruses-17-00582-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d273/12031208/1c38a66473f2/viruses-17-00582-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d273/12031208/053593cb8848/viruses-17-00582-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d273/12031208/ceb0ac380e6a/viruses-17-00582-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d273/12031208/9455b6bf4b8c/viruses-17-00582-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d273/12031208/1c38a66473f2/viruses-17-00582-g004.jpg

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本文引用的文献

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PLoS One. 2025 Mar 10;20(3):e0316050. doi: 10.1371/journal.pone.0316050. eCollection 2025.
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Characterization of Cetacean Morbillivirus in Humpback Whales, Brazil.巴西弓头鲸中麻疹病毒的特征。
Emerg Infect Dis. 2024 Jun;30(6):1296-1298. doi: 10.3201/eid3006.231769.
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Novel cetacean morbillivirus in a rare Fraser's dolphin (Lagenodelphis hosei) stranding from Maui, Hawai'i.来自夏威夷毛伊岛的罕见弗氏海豚(Lagenodelphis hosei)搁浅事件中发现新型鲸麻疹病毒。
Sci Rep. 2021 Aug 9;11(1):15986. doi: 10.1038/s41598-021-94460-6.
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Cetacean Morbillivirus Infection in a Killer Whale (Orcinus orca) from Brazil.巴西杀人鲸(虎鲸)感染犬瘟热病毒。
J Comp Pathol. 2020 Nov;181:26-32. doi: 10.1016/j.jcpa.2020.09.012. Epub 2020 Oct 26.
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Cetacean morbillivirus in Humpback whales' exhaled breath.座头鲸呼出的气息中存在鲸类麻疹病毒。
Transbound Emerg Dis. 2021 Jul;68(4):1736-1743. doi: 10.1111/tbed.13883. Epub 2020 Oct 30.
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The Pathology of Cetacean Morbillivirus Infection and Comorbidities in Guiana Dolphins During an Unusual Mortality Event (Brazil, 2017-2018).瓜头鲸疱疹病毒感染的病理学及合并症在一次不寻常死亡事件中的研究(巴西,2017-2018 年)。
Vet Pathol. 2020 Nov;57(6):845-857. doi: 10.1177/0300985820954550. Epub 2020 Sep 23.
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