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对离散大小的染色质片段进行散射分析,结果支持其呈柱状结构。

Scatter analysis of discrete-sized chromatin fragments favours a cylindrical organization.

作者信息

Lasters I, Wyns L, Muyldermans S, Baldwin J P, Poland G A, Nave C

出版信息

Eur J Biochem. 1985 Sep 2;151(2):283-9. doi: 10.1111/j.1432-1033.1985.tb09098.x.

DOI:10.1111/j.1432-1033.1985.tb09098.x
PMID:4029135
Abstract

Fragments of chromatin containing 23 +/- 2.5 nucleosomes have been fractionated after light nuclease treatment of chicken erythrocyte nuclei. Low-angle scattering measures the total z-average radius of gyration of the already well-defined particles and the shape of scatter curves can be compared with three-dimensional analysis as opposed to cross-section analysis of long chromatin fragments. The data show that the particles are not spherical, have no detectable hole in the center of the structure and are best represented by a solid rod-like shape such as that generated by a coil of nucleosomes with the centre perhaps filled with linker DNA and histone H1/H5. 23 nucleosome fragments, where the DNA is partially fragmented, have near-identical scatter curves to the above-defined intact particles, indicating the primary importance of histone proteins in maintaining the integrity of the chromatin higher-order structure. Neutron scattering shows the radii of gyration to be contrast-independent, which fits in with the model calculations for solenoids. Particles with fragmented DNA and the intact particles, therefore, behave as sections of a solenoidal higher-order structure and possibly are observed as "superbeads' only during the folding and unfolding pathways of nucleosome multimers.

摘要

在用微球菌核酸酶轻度处理鸡红细胞核后,已分离出含有23±2.5个核小体的染色质片段。小角散射测量已明确界定的颗粒的总z平均回转半径,并且散射曲线的形状可以与三维分析进行比较,这与长染色质片段的横截面分析不同。数据表明,这些颗粒不是球形的,在结构中心没有可检测到的空洞,并且最适合用实心棒状形状来表示,例如由核小体线圈产生的形状,其中心可能填充有连接DNA和组蛋白H1/H5。23个核小体片段(其中DNA部分断裂)具有与上述定义的完整颗粒几乎相同的散射曲线,表明组蛋白在维持染色质高阶结构完整性方面的首要重要性。中子散射表明回转半径与对比度无关,这与螺线管的模型计算相符。因此,具有断裂DNA的颗粒和完整颗粒表现为螺线管高阶结构的片段,并且可能仅在核小体多聚体的折叠和展开途径中被观察为“超级珠”。

相似文献

1
Scatter analysis of discrete-sized chromatin fragments favours a cylindrical organization.对离散大小的染色质片段进行散射分析,结果支持其呈柱状结构。
Eur J Biochem. 1985 Sep 2;151(2):283-9. doi: 10.1111/j.1432-1033.1985.tb09098.x.
2
Neutron scatter and diffraction techniques applied to nucleosome and chromatin structure.应用于核小体和染色质结构的中子散射与衍射技术。
Cell Biophys. 1986 Dec;9(1-2):35-66. doi: 10.1007/BF02797374.
3
Higher-order structures of chromatin in solution.溶液中染色质的高阶结构。
Eur J Biochem. 1979 Jul;97(2):593-602. doi: 10.1111/j.1432-1033.1979.tb13148.x.
4
Small angle neutron scattering studies of chromatin subunits in solution.溶液中染色质亚基的小角中子散射研究。
Cell. 1977 Jan;10(1):139-51. doi: 10.1016/0092-8674(77)90148-9.
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Hyperacetylation of core histones does not cause unfolding of nucleosomes. Neutron scatter data accords with disc shape of the nucleosome.核心组蛋白的过度乙酰化不会导致核小体解折叠。中子散射数据与核小体的盘状形状相符。
J Biol Chem. 1986 Jul 5;261(19):8784-92.
6
Low-angle neutron scattering from chromatin subunit particles.染色质亚基颗粒的低角度中子散射
Nucleic Acids Res. 1975 Nov;2(11):2163-76. doi: 10.1093/nar/2.11.2163.
7
Asymmetry and polarity of nucleosomes in chicken erythrocyte chromatin.鸡红细胞染色质中核小体的不对称性和极性
EMBO J. 1989 Jan;8(1):229-38. doi: 10.1002/j.1460-2075.1989.tb03368.x.
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Neutron scattering studies on chromatin higher-order structure.关于染色质高阶结构的中子散射研究。
Basic Life Sci. 1996;64:127-36. doi: 10.1007/978-1-4615-5847-7_13.
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Higher order folding of two different classes of chromatin isolated from chicken erythrocyte nuclei. A light scattering study.从鸡红细胞核中分离出的两类不同染色质的高阶折叠:光散射研究
Biochemistry. 1982 Mar 2;21(5):985-92. doi: 10.1021/bi00534a025.
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Neutron scattering studies and modeling of high mobility group 14 core nucleosome complex.高迁移率族14核心核小体复合物的中子散射研究与建模
Proc Natl Acad Sci U S A. 1982 Sep;79(17):5258-62. doi: 10.1073/pnas.79.17.5258.

引用本文的文献

1
Chromatin structures: dissecting their mixed patterns in nuclease digests.染色质结构:剖析其在核酸酶消化中的混合模式
Nucleic Acids Res. 1987 Oct 12;15(19):8087-103. doi: 10.1093/nar/15.19.8087.
2
The superstructure of chromatin and its condensation mechanism. III: Effect of monovalent and divalent cations X-ray solution scattering and hydrodynamic studies.染色质的上层结构及其凝聚机制。III:单价和二价阳离子的影响 X 射线溶液散射和流体动力学研究。
Eur Biophys J. 1987;14(5):307-19. doi: 10.1007/BF00254896.
3
Small angle x-ray scattering of chromatin. Radius and mass per unit length depend on linker length.
染色质的小角X射线散射。半径和单位长度质量取决于连接体长度。
Biophys J. 1991 Mar;59(3):606-18. doi: 10.1016/S0006-3495(91)82276-7.