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从鸡红细胞核中分离出的两类不同染色质的高阶折叠:光散射研究

Higher order folding of two different classes of chromatin isolated from chicken erythrocyte nuclei. A light scattering study.

作者信息

Fulmer A W, Bloomfield V A

出版信息

Biochemistry. 1982 Mar 2;21(5):985-92. doi: 10.1021/bi00534a025.

DOI:10.1021/bi00534a025
PMID:7074067
Abstract

Bulk chromatin fragments were excised from chicken erythrocyte nuclei by digestion with micrococcal nuclease. Fractionation into S chromatin (soluble at physiological ionic strengths) and I chromatin (insoluble at physiological ionic strengths) was achieved by dialysis against buffers containing 0.15 M NaCl. The effects of NaCl concentration on the molecular dimensions of S and I chromatins were determined by dynamic and static light scattering. Series of fragment lengths were obtained by gel filtration of S and I chromatins under ionic conditions which lead to maximal intramolecular compaction. Hydrodynamic radii and radii of gyration were determined for fragment lengths ranging from 8 to 53 nucleosomes. These data are in excellent agreement with calculations for extended helical structures. Close-packed solenoidal or superbead structures are not compatible with these data. Comparisons of molecular dimensions derived from light scattering and electron microscopy indicate that considerable shrinkage of chromatin fragments can occur when common methods of sample preparation are used for microscopy.

摘要

通过用微球菌核酸酶消化从鸡红细胞核中切下大量染色质片段。通过在含有0.15M NaCl的缓冲液中透析,将其分离为S染色质(在生理离子强度下可溶)和I染色质(在生理离子强度下不溶)。通过动态和静态光散射测定NaCl浓度对S和I染色质分子尺寸的影响。在导致最大分子内压缩的离子条件下,通过S和I染色质的凝胶过滤获得一系列片段长度。测定了长度范围为8至53个核小体的片段的流体动力学半径和回转半径。这些数据与扩展螺旋结构的计算结果非常吻合。紧密堆积的螺线管或超珠结构与这些数据不相符。来自光散射和电子显微镜的分子尺寸比较表明,当使用常规样品制备方法进行显微镜观察时,染色质片段可能会发生相当大的收缩。

相似文献

1
Higher order folding of two different classes of chromatin isolated from chicken erythrocyte nuclei. A light scattering study.从鸡红细胞核中分离出的两类不同染色质的高阶折叠:光散射研究
Biochemistry. 1982 Mar 2;21(5):985-92. doi: 10.1021/bi00534a025.
2
Chicken erythrocyte nucleus contains two classes of chromatin that differ in micrococcal nuclease susceptibility and solubility at physiological ionic strength.鸡红细胞核含有两类染色质,它们在微球菌核酸酶敏感性和生理离子强度下的溶解度方面存在差异。
Proc Natl Acad Sci U S A. 1981 Oct;78(10):5968-72. doi: 10.1073/pnas.78.10.5968.
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Differences of supranucleosomal organization in different kinds of chromatin: cell type-specific globular subunits containing different numbers of nucleosomes.不同类型染色质中超核小体组织的差异:含有不同数量核小体的细胞类型特异性球状亚基。
J Cell Biol. 1984 Jul;99(1 Pt 1):272-86. doi: 10.1083/jcb.99.1.272.
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Stability and reversibility of higher ordered structure of interphase chromatin: continuity of deoxyribonucleic acid is not required for maintenance of folded structure.间期染色质高级结构的稳定性和可逆性:维持折叠结构不需要脱氧核糖核酸的连续性。
Biochemistry. 1980 Jun 10;19(12):2544-54. doi: 10.1021/bi00553a002.
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Reversible in vitro packing of nucleosomal filaments into globular supranucleosomal units in chromatin of whole chick erythrocyte nuclei.在整个鸡红细胞细胞核的染色质中,核小体细丝可逆地体外包装成球状超核小体单位。
Eur J Cell Biol. 1980 Dec;23(1):171-88.
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Scatter analysis of discrete-sized chromatin fragments favours a cylindrical organization.对离散大小的染色质片段进行散射分析,结果支持其呈柱状结构。
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Biochemical and physiochemical characterization of chromatin fractions with different degrees of solubility isolated from chicken erythrocyte nuclei.从鸡红细胞核中分离出的具有不同溶解度的染色质组分的生化和物理化学特性
Biochemistry. 1986 Apr 22;25(8):1981-8. doi: 10.1021/bi00356a022.
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Small angle scattering of cell nuclei.细胞核的小角散射
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Interaction of chromatin with NaCl and MgCl2. Solubility and binding studies, transition to and characterization of the higher-order structure.染色质与氯化钠和氯化镁的相互作用。溶解度和结合研究、向高阶结构的转变及其表征。
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The organization of oligonucleosomes in yeast.酵母中寡核小体的组织形式。
Nucleic Acids Res. 1983 Jun 11;11(11):3717-36. doi: 10.1093/nar/11.11.3717.

引用本文的文献

1
Chromatin folding into higher order structure.染色质折叠成更高阶结构。
Biophys J. 1986 Jan;49(1):7-8. doi: 10.1016/S0006-3495(86)83570-6.
2
Chain flexibility and hydrodynamics of the B and Z forms of poly(dG-dC).poly(dG-dC).聚(dG-dC)·聚(dG-dC)的B型和Z型的链柔性与流体动力学
Nucleic Acids Res. 1983 Mar 25;11(6):1919-30. doi: 10.1093/nar/11.6.1919.
3
The superstructure of chromatin and its condensation mechanism. I. Synchrotron radiation X-ray scattering results.染色质的上层结构及其凝聚机制。I. 同步辐射X射线散射结果。
Eur Biophys J. 1986;13(3):157-73. doi: 10.1007/BF00542560.
4
Assembly of chromatin fibers into metaphase chromosomes analyzed by transmission electron microscopy and scanning electron microscopy.通过透射电子显微镜和扫描电子显微镜分析染色质纤维组装成中期染色体的过程。
Biophys J. 1986 Jan;49(1):221-31. doi: 10.1016/S0006-3495(86)83636-0.
5
Molecular flexibility of extended and compacted polynucleosomes. A steady-state fluorescence polarization study.伸展和压缩多核小体的分子柔韧性。稳态荧光偏振研究。
Eur Biophys J. 1988;16(4):231-41. doi: 10.1007/BF00261265.
6
The diameters of frozen-hydrated chromatin fibers increase with DNA linker length: evidence in support of variable diameter models for chromatin.冷冻水合染色质纤维的直径随DNA连接长度增加:支持染色质可变直径模型的证据。
J Cell Biol. 1990 Sep;111(3):795-806. doi: 10.1083/jcb.111.3.795.