Schimunek Johannes, Luukkonen Sohvi, Klambauer Günter
ELLIS Unit Linz and LIT AI Lab, Institute for Machine Learning, Johannes Kepler University Linz, A-4040 Linz, Austria.
J Chem Inf Model. 2025 May 12;65(9):4243-4250. doi: 10.1021/acs.jcim.4c02373. Epub 2025 Apr 30.
Today's drug discovery increasingly relies on computational and machine learning approaches to identify novel candidates, yet data scarcity remains a significant challenge. To address this limitation, we present , an application specifically designed to predict molecular activity in low-data scenarios. At its core, leverages a state-of-the-art few-shot activity prediction model, named MHNfs, which has demonstrated strong performance across a large set of prediction tasks in the benchmark data set FS-Mol. The application features an intuitive interface that enables users to prompt the model for precise activity predictions based on a small number of known active and inactive molecules, akin to interactive interfaces for large language models. To evaluate its efficacy, we simulate real-world scenarios by recasting PubChem bioassays as few-shot prediction tasks. offers a streamlined and accessible solution for deploying advanced few-shot learning models, providing a valuable tool for accelerating drug discovery.
如今的药物发现越来越依赖于计算和机器学习方法来识别新的候选药物,但数据稀缺仍然是一个重大挑战。为了解决这一限制,我们展示了[具体名称未给出],这是一款专门设计用于预测低数据场景下分子活性的应用程序。其核心是利用了一种名为MHNfs的先进少样本活性预测模型,该模型在基准数据集FS-Mol中的大量预测任务中都表现出了强大的性能。该应用程序具有直观的界面,类似于大型语言模型的交互界面,用户可以根据少量已知的活性和非活性分子提示模型进行精确的活性预测。为了评估其有效性,我们通过将PubChem生物测定重新构建为少样本预测任务来模拟真实世界的场景。[具体名称未给出]为部署先进的少样本学习模型提供了一种简化且易于使用的解决方案,为加速药物发现提供了一个有价值的工具。