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通过全基因组测序分析扩展犬弥漫性大B细胞淋巴瘤基因畸变谱

Expanding the Spectrum of Canine Diffuse Large B-Cell Lymphoma Genetic Aberrations Through Whole Genome Sequencing Analysis.

作者信息

Fanelli Antonella, Mazzone Eugenio, Giannuzzi Diana, Marconato Laura, Aresu Luca

机构信息

Department of Veterinary Sciences, University of Turin, Grugliasco, Turin, Italy.

Department of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padua, Legnaro, Padua, Italy.

出版信息

Vet Comp Oncol. 2025 Sep;23(3):346-357. doi: 10.1111/vco.13059. Epub 2025 May 4.

DOI:10.1111/vco.13059
PMID:40320296
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12378081/
Abstract

Diffuse large B-cell lymphoma (DLBCL) is one of the most prevalent haematological malignancies in both humans and dogs, characterised in both species by significant clinical heterogeneity and limited prognostic predictability. With the introduction of next-generation sequencing (NGS) technologies in veterinary medicine over the past decade, researchers have begun to elucidate the molecular basis of canine DLBCL (cDLBCL); however, much of the clinical heterogeneity associated with this tumour remains unexplained. In this study, we performed whole genome sequencing on 10 cDLBCL cases, all treated with chemo-immunotherapy, which exhibited similar clinico-pathological features but markedly different outcomes. Cases were classified as "poor" or "good" responders based on whether their lymphoma-specific survival fell below or above the cohort's median. Protein-coding variants and copy number aberrations unique to poor or good responders revealed novel candidate genes not previously identified in cDLBCL studies, while splicing, untranslated regions, and intronic variants were detected in genes already known to be recurrently mutated. In conclusion, our investigation has broadened the spectrum of potentially pathogenic variants implicated in cDLBCL, though further studies with larger cohorts are necessary to validate these findings.

摘要

弥漫性大B细胞淋巴瘤(DLBCL)是人类和犬类中最常见的血液系统恶性肿瘤之一,在这两个物种中都具有显著的临床异质性和有限的预后可预测性。在过去十年中,随着下一代测序(NGS)技术引入兽医学领域,研究人员已开始阐明犬类DLBCL(cDLBCL)的分子基础;然而,与这种肿瘤相关的许多临床异质性仍无法解释。在本研究中,我们对10例cDLBCL病例进行了全基因组测序,所有病例均接受了化疗免疫治疗,这些病例表现出相似的临床病理特征,但预后明显不同。根据淋巴瘤特异性生存期是否低于或高于队列中位数,将病例分为“差”或“好”反应者。差反应者或好反应者特有的蛋白质编码变异和拷贝数畸变揭示了cDLBCL研究中以前未发现的新候选基因,同时在已知经常发生突变的基因中检测到剪接、非翻译区和内含子变异。总之,我们的研究拓宽了与cDLBCL相关的潜在致病变异谱,不过需要对更大的队列进行进一步研究以验证这些发现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/b5bd4d44d3f6/VCO-23-346-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/c0bde8a4fcfb/VCO-23-346-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/f202c6263505/VCO-23-346-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/f4ea18dee65d/VCO-23-346-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/2bc9df1359ef/VCO-23-346-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/b5bd4d44d3f6/VCO-23-346-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/c0bde8a4fcfb/VCO-23-346-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/f202c6263505/VCO-23-346-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/f4ea18dee65d/VCO-23-346-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/2bc9df1359ef/VCO-23-346-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1e9/12378081/b5bd4d44d3f6/VCO-23-346-g004.jpg

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Selective HIF2A Inhibitors in the Management of Clear Cell Renal Cancer and Von Hippel-Lindau-Disease-Associated Tumors.选择性 HIF2A 抑制剂在透明细胞肾细胞癌和 von Hippel-Lindau 病相关肿瘤治疗中的应用。
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The genomic landscape of canine osteosarcoma cell lines reveals conserved structural complexity and pathway alterations.
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PLoS One. 2022 Sep 13;17(9):e0274383. doi: 10.1371/journal.pone.0274383. eCollection 2022.
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MBD4 deficiency is predictive of response to immune checkpoint inhibitors in metastatic uveal melanoma patients.MBD4 缺乏可预测转移性葡萄膜黑素瘤患者对免疫检查点抑制剂的反应。
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Super-enhancer hypermutation alters oncogene expression in B cell lymphoma.超级增强子突变改变了 B 细胞淋巴瘤中的癌基因表达。
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