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[具体基因名称]表达的多组学特征及其与分子改变、免疫表型和癌症预后的关联。 需注意,原文中“of and ”部分缺失具体基因信息,以上译文根据常见情况补充了“[具体基因名称]”,实际翻译时应根据准确的原文内容进行完整准确翻译。

Multiomic Characterization of and Expression and Their Association With Molecular Alterations, Immune Phenotypes, and Cancer Outcomes.

作者信息

Nagasaka Misako, Warnecke Brian, Ou Sai-Hong Ignatius, Bannoura Sahar F, Kim Chul, Elliott Andrew, Halmos Balazs, Hoon Dave, Darabi Sourat, Sukari Ammar, Radovich Milan, Lou Emil, Sledge George, El-Deiry Wafik, Al-Hallak Mohammed Najeeb, Pasche Boris C, Azmi Asfar S

机构信息

University of California Irvine, Orange, CA.

St Marianna University School of Medicine, Kawasaki City, Kanagawa, Japan.

出版信息

JCO Oncol Adv. 2025 May 1;2(1):00022. doi: 10.1200/OA-24-00033. eCollection 2025.

DOI:10.1200/OA-24-00033
PMID:40330141
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12052079/
Abstract

PURPOSE

Regulator of chromosome condensation 1 () and have been shown to play important roles in the regulation of cell cycle, DNA damage response, and nucleocytoplasmic transport.

MATERIALS AND METHODS

DNA (592-gene or whole exome) and RNA (whole transcriptome) sequencing was performed at Caris Life Sciences (Phoenix, AZ). Samples were stratified by expression quartile thresholds (Q1: low, Q4: high) for small cell lung cancer (SCLC; n = 876), non-small cell lung cancer (NSCLC; n = 21,603), gastric cancer (GC; n = 1,908), pancreatic cancer (PC; n = 5,071), and colorectal cancer (CRC; n = 14,892). Statistical significance was determined using chi-square and Wilcoxon rank-sum tests and adjusted for multiple comparisons (* < .05). Corresponding analyses were run for .

RESULTS

Median mRNA expression was highest in SCLC (14.3 transcript per million [TPM]), followed by GC (9.9), NSCLC (9.9), CRC (9.8), and PC (6.9). Similar to , the median expressions were highest in SCLC (36.2 TPM). Tumor mutational burden-high rates were positively associated with increasing expression quartiles (Q1-4) in NSCLC (31%-41%), GC (7%-22%), and CRC (5%-17%) and with increasing expression in NSCLC and CRC only. Higher expression with and was associated with worse overall survival in NSCLC (hazard ratio [HR] for and were 1.3 and 1.3, respectively), PC (HR for and were 1.5 and 1.12, respectively), and CRC (HR for and were 1.3 and 1.03, respectively).

CONCLUSION

and expression is a negative prognostic marker in NSCLC, PC, and CRC. Further studies to investigate and function at the molecular level may provide opportunities for novel targeted drug development.

摘要

目的

染色体凝聚调节因子1()和已被证明在细胞周期调控、DNA损伤反应及核质运输中发挥重要作用。

材料与方法

在Caris生命科学公司(亚利桑那州凤凰城)进行DNA(592基因或全外显子组)和RNA(全转录组)测序。对小细胞肺癌(SCLC;n = 876)、非小细胞肺癌(NSCLC;n = 21,603)、胃癌(GC;n = 1,908)、胰腺癌(PC;n = 5,071)和结直肠癌(CRC;n = 14,892)样本,根据表达四分位数阈值(Q1:低,Q4:高)进行分层。使用卡方检验和Wilcoxon秩和检验确定统计学显著性,并针对多重比较进行校正(* <.05)。对进行了相应分析。

结果

SCLC中染色体凝聚调节因子1 mRNA表达中位数最高(每百万转录本[TPM]为14.3),其次是GC(9.9)、NSCLC(9.9)、CRC(9.8)和PC(6.9)。与染色体凝聚调节因子1相似,SCLC中的中位数表达最高(36.2 TPM)。肿瘤突变负荷高发生率与NSCLC(31%-41%)、GC(7%-22%)和CRC(5%-17%)中染色体凝聚调节因子1表达四分位数增加(Q1 - 4)呈正相关,且仅与NSCLC和CRC中染色体凝聚调节因子1表达增加相关。染色体凝聚调节因子1和表达较高与NSCLC(染色体凝聚调节因子1和的风险比[HR]分别为1.3和1.3)、PC(染色体凝聚调节因子1和的HR分别为1.5和1.12)及CRC(染色体凝聚调节因子1和的HR分别为1.3和1.03)的总生存期较差相关。

结论

染色体凝聚调节因子1和表达是NSCLC、PC和CRC的不良预后标志物。进一步在分子水平研究染色体凝聚调节因子1和功能可能为新型靶向药物开发提供机会。

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本文引用的文献

1
A human pan-cancer system analysis of regulator of chromatin condensation 2.染色质凝聚调节因子2的人类泛癌系统分析
Heliyon. 2023 Feb 10;9(2):e13599. doi: 10.1016/j.heliyon.2023.e13599. eCollection 2023 Feb.
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RCC1 Expression as a Prognostic Marker in Colorectal Liver Oligometastases.RCC1 表达作为结直肠癌肝寡转移预后标志物。
Pathol Oncol Res. 2021 Dec 2;27:1610077. doi: 10.3389/pore.2021.1610077. eCollection 2021.
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Integrative and Comprehensive Pancancer Analysis of Regulator of Chromatin Condensation 1 (RCC1).染色质凝聚调控因子 1(RCC1)的综合全面癌症分析。
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Down-regulation of RCC1 sensitizes immunotherapy by up-regulating PD-L1 via p27 /CDK4 axis in non-small cell lung cancer.下调 RCC1 通过 p27/CDK4 轴上调 PD-L1 增敏非小细胞肺癌的免疫治疗。
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The nuclear export protein XPO1 - from biology to targeted therapy.核输出蛋白 XPO1——从生物学到靶向治疗。
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The Multifaceted Roles of RCC1 in Tumorigenesis.RCC1在肿瘤发生中的多方面作用。
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RCC2 promotes breast cancer progression through regulation of Wnt signaling and inducing EMT.RCC2通过调控Wnt信号通路和诱导上皮-间质转化促进乳腺癌进展。
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Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data.通过 RNA-seq 数据解析揭示的肿瘤免疫微环境的分子和药理学调节剂。
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