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癌症全基因组突变分析及其与免疫检查点阻断疗效的关联

Pan-cancer analysis of mutation and its association with the efficacy of immune checkpoint blockade.

作者信息

Chen Lijin, Li Yingying, Zhao Hong, Huang Jinyuan, Yan Huimeng, Lin Xiaoyan, Zhao Bin

机构信息

Fujian Medical University Union Hospital, Fuzhou, Fujian 350001, China.

Quanzhou First Hospital Affiliated to Fujian Medical University, Quanzhou, Fujian 362000, China.

出版信息

Genes Dis. 2024 Nov 8;12(4):101450. doi: 10.1016/j.gendis.2024.101450. eCollection 2025 Jul.

DOI:10.1016/j.gendis.2024.101450
PMID:40330151
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12053711/
Abstract

The mesenchymal-epithelial transition factor () proto-oncogene plays important roles during tumor development. Recently, evidence has revealed signaling may impact tumor immunogenicity and regulate the immune response. Here we conducted a comprehensive bioinformatic and clinical analysis to explore the characteristics of mutation and its association with the outcomes in pan-cancer immunotherapy. In 4149 patients with 12 tumor types treated with immune checkpoint inhibitors, mutation indicated favorable overall survival (hazard ratio = 0.61; 95% CI, 0.50-0.74;  < 0.001), progression-free survival (hazard ratio = 0.74; 95% CI, 0.60-0.92;  = 0.01), and objective response rate (40.3% . 28.1%;  = 0.003). Moreover, we developed a nomogram to estimate the 12-month and 24-month survival probabilities after the initiation of immunotherapy. Further multi-omics analysis on both intrinsic and extrinsic immune landscapes revealed that mutation enhanced tumor immunogenicity, enriched infiltration of immune cells, and improved immune responses. In summary, mutation improves cancer immunity and is an independent biomarker for favorable outcomes in pan-cancer immunotherapy. These results may influence clinical practices, guide treatment decision-making, and develop immunotherapy for personalized care.

摘要

间充质上皮转化因子()原癌基因在肿瘤发展过程中发挥重要作用。最近,有证据表明信号可能影响肿瘤免疫原性并调节免疫反应。在此,我们进行了全面的生物信息学和临床分析,以探讨在泛癌免疫治疗中突变的特征及其与预后的关联。在4149例接受免疫检查点抑制剂治疗的12种肿瘤类型患者中,突变提示总生存期良好(风险比=0.61;95%可信区间,0.50-0.74;<0.001)、无进展生存期良好(风险比=0.74;95%可信区间,0.60-0.92;=0.01)和客观缓解率良好(40.3%对28.1%;=0.003)。此外,我们制定了一个列线图来估计免疫治疗开始后12个月和24个月的生存概率。对内在和外在免疫格局的进一步多组学分析表明,突变增强了肿瘤免疫原性,丰富了免疫细胞浸润,并改善了免疫反应。总之,突变改善了癌症免疫,是泛癌免疫治疗中预后良好的独立生物标志物。这些结果可能影响临床实践,指导治疗决策,并开发个性化护理的免疫治疗方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/f8529387845b/figs1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/ebb42d6613bb/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/44469c8ca5f4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/feff29fd0eb3/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/fb5eff428296/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/f8529387845b/figs1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/ebb42d6613bb/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/44469c8ca5f4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/feff29fd0eb3/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/fb5eff428296/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d070/12053711/f8529387845b/figs1.jpg

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本文引用的文献

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Pan-cancer Analysis Reveals m6A Variation and Cell-specific Regulatory Network in Different Cancer Types.泛癌症分析揭示了不同癌症类型中 m6A 变异和细胞特异性调控网络。
Genomics Proteomics Bioinformatics. 2024 Oct 15;22(4). doi: 10.1093/gpbjnl/qzae052.
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Sex disparities revealed by single-cell and bulk sequencing and their impacts on the efficacy of immunotherapy in esophageal cancer.单细胞测序和批量测序揭示的性别差异及其对食管癌免疫治疗疗效的影响。
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实体瘤中MET改变的检测平台及其临床意义:文献综述
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Cancer cell-intrinsic mechanisms driving acquired immune tolerance.肿瘤细胞内在机制驱动获得性免疫耐受。
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MET Receptor Tyrosine Kinase Inhibition Reduces Interferon-Gamma (IFN-γ)-Stimulated PD-L1 Expression through the STAT3 Pathway in Melanoma Cells.MET受体酪氨酸激酶抑制通过STAT3途径降低黑色素瘤细胞中干扰素-γ(IFN-γ)刺激的PD-L1表达。
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