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中国候鸟携带的一株含有 - 的多重耐药菌株的综合基因组和表型特征分析

Integrated Genomic and Phenotypic Characterization of an -Harboring Multidrug Resistant Strain From Migratory Birds in China.

作者信息

Huang Ronglei, Ji Xue, Liang Bing, Jiang Bowen, Wang Danhong, Tang Yi, Zhang Chengyang, Zhou Ang, Li Nan, Du Chongtao, Sun Yang

机构信息

State Key Laboratory for Diagnosis and Treatment of Severe Zoonotic Infectious Diseases, Key Laboratory for Zoonosis Research of the Ministry of Education, Institute of Zoonosis, and College of Veterinary Medicine, Jilin University, Changchun 130062, China.

Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, China.

出版信息

Transbound Emerg Dis. 2025 May 1;2025:7631217. doi: 10.1155/tbed/7631217. eCollection 2025.

Abstract

The global rise in antibiotic resistance among multidrug resistant (MDR) Gram-negative (GN) bacteria has posed significant health challenges, leading to the resurgence of colistin as a key defense against these bacteria. However, the widespread use of colistin has resulted in the rapid emergence of colistin resistance on a global scale. Ten members of the (mobile colistin resistance) gene family, through , have been reported and documented. Currently, bacteria reported to carry the gene are sensitive to colistin, but the mechanism underlying the low-level resistance phenomenon mediated by remains unclear. In this study, antimicrobial susceptibility testing (AST) was conducted on (E.coli) isolated from Chinese migratory birds, resulting in the selection of 87 strains exhibiting MDR phenotypes. Whole-genome sequencing (draft) was performed on these 87 MDR strains, and for one of the strains carrying the gene, whole-genome sequencing, phenotypic characterization, AST and conjugation experiments were conducted to identify its resistance phenotypes and genetic characteristics. Whole-genome sequencing (draft) of 87 MDR isolates revealed a diverse array of resistance genes, predominantly including aminoglycoside, -lactam, tetracycline, and sulfonamide resistance genes. Remarkably, one isolate, despite being sensitive to colistin, harbored the gene. Further sequencing showed that was located in the conserved region of , a hotspot for movable elements with various insertion sequences (ISs) or transposons nearby. Phenotypic characterization indicated that the MDR plasmid pGN25- had no significant effect on the growth of GN25 and its derivatives but reduced the number of bacterial flagella. It is particularly important to note that bacteria harboring the gene may exhibit low minimum inhibitory concentration (MIC) values, but that the MIC values under colistin selective pressure can become progressively higher and exacerbate the difficulty of treating infections caused by -associated bacteria. Therefore, vigilance for such "silent transmission" is warranted, and continuous monitoring of the spread of is necessary in the future.

摘要

多重耐药(MDR)革兰氏阴性(GN)菌的抗生素耐药性在全球范围内不断上升,给健康带来了重大挑战,这使得黏菌素作为对抗这些细菌的关键防线得以重新启用。然而,黏菌素的广泛使用导致了全球范围内黏菌素耐药性的迅速出现。据报道和记录,(可移动黏菌素耐药)基因家族中有十个成员。目前,报道携带该基因的细菌对黏菌素敏感,但由该基因介导的低水平耐药现象的潜在机制仍不清楚。在本研究中,对从中国候鸟中分离出的大肠杆菌进行了药敏试验(AST),筛选出87株表现出多重耐药表型的菌株。对这87株多重耐药大肠杆菌菌株进行了全基因组测序(草图),并对其中一株携带该基因的菌株进行了全基因组测序、表型特征分析、药敏试验和接合试验,以确定其耐药表型和遗传特征。87株多重耐药大肠杆菌分离株的全基因组测序(草图)显示出多种耐药基因,主要包括氨基糖苷类、β-内酰胺类、四环素类和磺胺类耐药基因。值得注意的是,一株分离株尽管对黏菌素敏感,但却携带该基因。进一步测序表明,该基因位于一个保守区域,该区域是一个可移动元件的热点,附近有各种插入序列(ISs)或转座子。表型特征表明,多重耐药质粒pGN25-对GN25及其衍生物的生长没有显著影响,但减少了细菌鞭毛的数量。特别需要注意的是,携带该基因的细菌可能表现出较低的最低抑菌浓度(MIC)值,但在黏菌素选择压力下,MIC值可能会逐渐升高,加剧治疗由该基因相关细菌引起的感染的难度。因此,有必要警惕这种“沉默传播”,未来需要持续监测该基因的传播情况。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d537/12061519/50b8cd9f56ad/TBED2025-7631217.001.jpg

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