Alamos Simon, Szarzanowicz Matthew J, Thompson Mitchell G, Stevens Danielle M, Kirkpatrick Liam D, Dee Amanda, Pannu Hamreet, Cui Ruoming, Liu Shuying, Nimavat Monikaben, Krasileva Ksenia, Baidoo Edward E K, Shih Patrick M
Joint BioEnergy Institute, Emeryville, CA, USA.
Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Nat Plants. 2025 May 12. doi: 10.1038/s41477-025-01996-w.
Agrobacterium pathogenesis, which involves transferring T-DNA into plant cells, is the cornerstone of plant genetic engineering. As the applications that rely on Agrobacterium increase in sophistication, it becomes critical to achieve a quantitative and predictive understanding of T-DNA expression at the level of single plant cells. Here we examine if a classic Poisson model of interactions between pathogens and host cells holds true for Agrobacterium infecting Nicotiana benthamiana. Systematically challenging this model revealed antagonistic and synergistic density-dependent interactions between bacteria that do not require quorum sensing. Using various approaches, we studied the molecular basis of these interactions. To overcome the engineering constraints imposed by antagonism, we created a dual binary vector system termed 'BiBi', which can improve the efficiency of a reconstituted complex metabolic pathway in a predictive fashion. Our findings illustrate how combining theoretical models with quantitative experiments can reveal new principles of bacterial pathogenesis, impacting both fundamental and applied plant biology.
农杆菌致病机制涉及将T-DNA转移到植物细胞中,是植物基因工程的基石。随着依赖农杆菌的应用变得越来越复杂,在单个植物细胞水平上实现对T-DNA表达的定量和预测性理解变得至关重要。在这里,我们研究了病原体与宿主细胞之间相互作用的经典泊松模型是否适用于感染本氏烟草的农杆菌。系统地挑战该模型揭示了细菌之间不需要群体感应的拮抗和协同密度依赖性相互作用。我们使用各种方法研究了这些相互作用的分子基础。为了克服拮抗作用带来的工程限制,我们创建了一个称为“BiBi”的双元双载体系统,它可以以预测的方式提高重组复合代谢途径的效率。我们的研究结果说明了将理论模型与定量实验相结合如何能够揭示细菌致病的新原理,对基础植物生物学和应用植物生物学都产生影响。