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通过转录组分析确定的肌痛性脑脊髓炎/慢性疲劳综合征(ME/CFS)患者免疫特征的应激诱导变化

Stress-Induced Changes in Immune Signatures in ME/CFS Patients Determined by Transcriptome Analysis.

作者信息

Gamer Jackson, Van Booven Derek, Zarnowski Oskar, Perez Melanie, Frank Joshua, Pangeni Rajendra P, Collado Fanny, Klimas Nancy G, Oltra Elisa, Nathanson Lubov

机构信息

Institute for Neuro Immune Medicine, Dr. Kiran C. Patel College of Osteopathic Medicine, Nova Southeastern University, Fort Lauderdale, FL, USA.

Dr. J.P. Hussman Institute for Human Genomics, Miller School of Medicine, University of Miami, Miami, FL, USA.

出版信息

Methods Mol Biol. 2025;2920:103-112. doi: 10.1007/978-1-0716-4498-0_7.

DOI:10.1007/978-1-0716-4498-0_7
PMID:40372680
Abstract

Myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) is a chronic, complex multi-organ illness characterized by unexplained debilitating fatigue and post-exertional malaise (PEM). We evaluated transcriptomic changes in peripheral blood mononuclear cells (PBMC) of ME/CFS patients undergoing an exercise challenge and explored the transcriptomic response to exercise and recovery in PBMC of ME/CFS patients, as compared to healthy controls using RNA sequencing technology. As transcriptomic changes in ME/CFS patients are still in the phase of discovery, analysis of data has to be stringent, and the most important results have to be validated by a different technology, such as real-time PCR or NanoString.

摘要

肌痛性脑脊髓炎/慢性疲劳综合征(ME/CFS)是一种慢性、复杂的多器官疾病,其特征为不明原因的使人衰弱的疲劳和运动后不适(PEM)。我们使用RNA测序技术评估了接受运动挑战的ME/CFS患者外周血单核细胞(PBMC)的转录组变化,并探讨了与健康对照相比,ME/CFS患者PBMC对运动和恢复的转录组反应。由于ME/CFS患者的转录组变化仍处于发现阶段,数据的分析必须严格,最重要的结果必须通过实时PCR或NanoString等不同技术进行验证。

相似文献

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Stress-Induced Changes in Immune Signatures in ME/CFS Patients Determined by Transcriptome Analysis.通过转录组分析确定的肌痛性脑脊髓炎/慢性疲劳综合征(ME/CFS)患者免疫特征的应激诱导变化
Methods Mol Biol. 2025;2920:103-112. doi: 10.1007/978-1-0716-4498-0_7.
2
Stress-Induced Transcriptomic Changes in Females with Myalgic Encephalomyelitis/Chronic Fatigue Syndrome Reveal Disrupted Immune Signatures.应激诱导的肌痛性脑脊髓炎/慢性疲劳综合征女性的转录组学变化揭示了免疫特征的紊乱。
Int J Mol Sci. 2023 Jan 31;24(3):2698. doi: 10.3390/ijms24032698.
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Whole blood human transcriptome and virome analysis of ME/CFS patients experiencing post-exertional malaise following cardiopulmonary exercise testing.静息状态下心肺运动试验后出现劳累后不适的 ME/CFS 患者的全血人类转录组和病毒组分析。
PLoS One. 2019 Mar 21;14(3):e0212193. doi: 10.1371/journal.pone.0212193. eCollection 2019.
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本文引用的文献

1
Dynamic Epigenetic Changes during a Relapse and Recovery Cycle in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome.肌痛性脑脊髓炎/慢性疲劳综合征复发和恢复周期中的动态表观遗传变化。
Int J Mol Sci. 2022 Oct 6;23(19):11852. doi: 10.3390/ijms231911852.
2
Metabolomic Evidence for Peroxisomal Dysfunction in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome.代谢组学证据表明肌痛性脑脊髓炎/慢性疲劳综合征的过氧化物酶体功能障碍。
Int J Mol Sci. 2022 Jul 18;23(14):7906. doi: 10.3390/ijms23147906.
3
RNA-seq library preparation for comprehensive transcriptome analysis in cancer cells: The impact of insert size.
用于癌细胞综合转录组分析的RNA测序文库制备:插入片段大小的影响
Genomics. 2021 Nov;113(6):4149-4162. doi: 10.1016/j.ygeno.2021.10.018. Epub 2021 Nov 3.
4
Skewing of the B cell receptor repertoire in myalgic encephalomyelitis/chronic fatigue syndrome.肌痛性脑脊髓炎/慢性疲劳综合征中 B 细胞受体库的偏倚。
Brain Behav Immun. 2021 Jul;95:245-255. doi: 10.1016/j.bbi.2021.03.023. Epub 2021 Mar 29.
5
In-Depth Analysis of the Plasma Proteome in ME/CFS Exposes Disrupted Ephrin-Eph and Immune System Signaling.对肌痛性脑脊髓炎/慢性疲劳综合征患者血浆蛋白质组的深入分析揭示了 Ephrin-Eph 信号通路和免疫系统信号通路的紊乱。
Proteomes. 2021 Jan 29;9(1):6. doi: 10.3390/proteomes9010006.
6
Changes in DNA methylation profiles of myalgic encephalomyelitis/chronic fatigue syndrome patients reflect systemic dysfunctions.肌痛性脑脊髓炎/慢性疲劳综合征患者的 DNA 甲基化谱变化反映了全身性功能障碍。
Clin Epigenetics. 2020 Nov 4;12(1):167. doi: 10.1186/s13148-020-00960-z.
7
A SWATH-MS analysis of Myalgic Encephalomyelitis/Chronic Fatigue Syndrome peripheral blood mononuclear cell proteomes reveals mitochondrial dysfunction.一项针对肌痛性脑脊髓炎/慢性疲劳综合征外周血单核细胞蛋白质组的SWATH-MS分析揭示了线粒体功能障碍。
J Transl Med. 2020 Sep 24;18(1):365. doi: 10.1186/s12967-020-02533-3.
8
Plasma proteomic profiling suggests an association between antigen driven clonal B cell expansion and ME/CFS.血浆蛋白质组谱分析提示抗原驱动的克隆 B 细胞扩增与 ME/CFS 之间存在关联。
PLoS One. 2020 Jul 21;15(7):e0236148. doi: 10.1371/journal.pone.0236148. eCollection 2020.
9
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets.Metascape 为系统水平数据集的分析提供了面向生物学家的资源。
Nat Commun. 2019 Apr 3;10(1):1523. doi: 10.1038/s41467-019-09234-6.
10
Whole blood human transcriptome and virome analysis of ME/CFS patients experiencing post-exertional malaise following cardiopulmonary exercise testing.静息状态下心肺运动试验后出现劳累后不适的 ME/CFS 患者的全血人类转录组和病毒组分析。
PLoS One. 2019 Mar 21;14(3):e0212193. doi: 10.1371/journal.pone.0212193. eCollection 2019.