• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

水稻中铁生物强化目标蛋白OsVIT2介导液泡铁转运的分子基础

Molecular Basis for Vacuolar Iron Transport by OsVIT2, a Target for Iron Biofortification in Rice.

作者信息

Arend L B, Lima D S, Costa M G S, Ricachenevsky F K, Verli H

机构信息

Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.

Fundação Oswaldo Cruz, Rio de Janeiro, Rio Grande do Sul, Brazil.

出版信息

Proteins. 2025 Oct;93(10):1717-1731. doi: 10.1002/prot.26843. Epub 2025 May 15.

DOI:10.1002/prot.26843
PMID:40375555
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12433260/
Abstract

Iron deficiency is the prevalent and most widespread nutritional shortfall for humans, affecting over 30% of the global population and leading to anemia, particularly among preschool-aged children and pregnant women in developing countries. Simultaneously, while half of the world's population depends on rice (Oryza sativa L.) as a staple food, this cereal does not provide a sufficient amount of that micronutrient to meet these people's nutritional needs: even when iron is readily available in the soil, it does not accumulate in the consumed portion of the grain, namely, the starchy endosperm, being instead retained in the aleurone layer, in the pericarp and in the embryo. In this context, the present work applies computational biology tools-such as normal mode analysis and molecular dynamics simulations-to elucidate the behavior and transport mechanism of the Vacuolar Iron Transporter 2 (OsVIT2), a central protein for iron homeostasis in rice, with the objective of laying the foundations for future OsVIT2 engineering projects that could be articulated with ongoing efforts to promote iron biofortification in rice. We shed light on the interplay between protonation state, configuration and hydration of OsVIT2's pore; on the mechanics of its opening and on the ever-shifting hydrogen bond network contained within it. We also explore the potential contribution of the "flexible arms" to the iron-capturing function performed by the cytoplasmic domain.

摘要

缺铁是人类中普遍且最为广泛的营养不足问题,影响着超过30%的全球人口,并导致贫血,特别是在发展中国家的学龄前儿童和孕妇中。同时,虽然世界上一半的人口以水稻(Oryza sativa L.)为主食,但这种谷物无法提供足够量的该种微量营养素来满足这些人的营养需求:即使土壤中铁元素易于获取,它也不会在谷物的可食用部分即淀粉胚乳中积累,而是保留在糊粉层、果皮和胚中。在此背景下,本研究应用计算生物学工具,如正常模式分析和分子动力学模拟,来阐明液泡铁转运蛋白2(OsVIT2)的行为和转运机制,OsVIT2是水稻中铁稳态的核心蛋白,目的是为未来的OsVIT2工程项目奠定基础,这些项目可以与目前促进水稻铁生物强化的努力相结合。我们揭示了OsVIT2孔的质子化状态、构象和水合作用之间的相互作用;其开放机制以及其中不断变化的氢键网络。我们还探讨了“柔性臂”对细胞质结构域执行的铁捕获功能的潜在贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/25883f44505c/PROT-93-1717-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/872db3fffd99/PROT-93-1717-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/350e91233280/PROT-93-1717-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/09e8922eac9f/PROT-93-1717-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/3bc1b5739c99/PROT-93-1717-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/e78eeed12bda/PROT-93-1717-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/f4df341db6b0/PROT-93-1717-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/8728770a28aa/PROT-93-1717-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/25883f44505c/PROT-93-1717-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/872db3fffd99/PROT-93-1717-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/350e91233280/PROT-93-1717-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/09e8922eac9f/PROT-93-1717-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/3bc1b5739c99/PROT-93-1717-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/e78eeed12bda/PROT-93-1717-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/f4df341db6b0/PROT-93-1717-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/8728770a28aa/PROT-93-1717-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/241d/12433260/25883f44505c/PROT-93-1717-g003.jpg

相似文献

1
Molecular Basis for Vacuolar Iron Transport by OsVIT2, a Target for Iron Biofortification in Rice.水稻中铁生物强化目标蛋白OsVIT2介导液泡铁转运的分子基础
Proteins. 2025 Oct;93(10):1717-1731. doi: 10.1002/prot.26843. Epub 2025 May 15.
2
Prescription of Controlled Substances: Benefits and Risks管制药品的处方:益处与风险
3
Aspects of Genetic Diversity, Host Specificity and Public Health Significance of Single-Celled Intestinal Parasites Commonly Observed in Humans and Mostly Referred to as 'Non-Pathogenic'.人类常见且大多被称为“非致病性”的单细胞肠道寄生虫的遗传多样性、宿主特异性及公共卫生意义
APMIS. 2025 Sep;133(9):e70036. doi: 10.1111/apm.70036.
4
Sexual Harassment and Prevention Training性骚扰与预防培训
5
"In a State of Flow": A Qualitative Examination of Autistic Adults' Phenomenological Experiences of Task Immersion.“心流状态”:对自闭症成年人任务沉浸现象学体验的质性研究
Autism Adulthood. 2024 Sep 16;6(3):362-373. doi: 10.1089/aut.2023.0032. eCollection 2024 Sep.
6
Home treatment for mental health problems: a systematic review.心理健康问题的居家治疗:一项系统综述
Health Technol Assess. 2001;5(15):1-139. doi: 10.3310/hta5150.
7
Post-pandemic planning for maternity care for local, regional, and national maternity systems across the four nations: a mixed-methods study.针对四个地区的地方、区域和国家孕产妇保健系统的疫情后规划:一项混合方法研究。
Health Soc Care Deliv Res. 2025 Sep;13(35):1-25. doi: 10.3310/HHTE6611.
8
EORTC guidelines for the use of erythropoietic proteins in anaemic patients with cancer: 2006 update.欧洲癌症研究与治疗组织(EORTC)癌症贫血患者促红细胞生成蛋白使用指南:2006年更新版
Eur J Cancer. 2007 Jan;43(2):258-70. doi: 10.1016/j.ejca.2006.10.014. Epub 2006 Dec 19.
9
Portion, package or tableware size for changing selection and consumption of food, alcohol and tobacco.用于改变食品、酒精饮料和烟草的选择及消费量的份量、包装或餐具尺寸。
Cochrane Database Syst Rev. 2015 Sep 14;2015(9):CD011045. doi: 10.1002/14651858.CD011045.pub2.
10
Group-based interventions to reduce gambling involvement among male football fans: a synopsis of findings from a feasibility study.基于群体的干预措施以减少男性足球迷的赌博行为:一项可行性研究结果概述
Public Health Res (Southampt). 2025 Jul;13(6):1-24. doi: 10.3310/SWWP9393.

本文引用的文献

1
Biofortification of Crops to Fight Anemia: Role of Vacuolar Iron Transporters.作物生物强化对抗贫血:液泡铁转运蛋白的作用
J Agric Food Chem. 2023 Mar 1;71(8):3583-3598. doi: 10.1021/acs.jafc.2c07727. Epub 2023 Feb 20.
2
ColabFold: making protein folding accessible to all.ColabFold:让蛋白质折叠变得人人可用。
Nat Methods. 2022 Jun;19(6):679-682. doi: 10.1038/s41592-022-01488-1. Epub 2022 May 30.
3
Integration of Experimental Data and Use of Automated Fitting Methods in Developing Protein Force Fields.实验数据整合及自动拟合方法在蛋白质力场开发中的应用
Commun Chem. 2022;5. doi: 10.1038/s42004-022-00653-z. Epub 2022 Mar 18.
4
The Role of Membrane Transporters in the Biofortification of Zinc and Iron in Plants.膜转运蛋白在植物锌和铁生物强化中的作用
Biol Trace Elem Res. 2023 Jan;201(1):464-478. doi: 10.1007/s12011-022-03159-w. Epub 2022 Feb 19.
5
Regulation of Cytosolic pH: The Contributions of Plant Plasma Membrane H-ATPases and Multiple Transporters.细胞质 pH 调节:植物质膜 H+-ATP 酶和多种转运蛋白的贡献。
Int J Mol Sci. 2021 Nov 30;22(23):12998. doi: 10.3390/ijms222312998.
6
Highly accurate protein structure prediction with AlphaFold.利用 AlphaFold 进行高精度蛋白质结构预测。
Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15.
7
PredictProtein - Predicting Protein Structure and Function for 29 Years.PredictProtein - 预测蛋白质结构和功能 29 年。
Nucleic Acids Res. 2021 Jul 2;49(W1):W535-W540. doi: 10.1093/nar/gkab354.
8
Role of a vacuolar iron transporter OsVIT2 in the distribution of iron to rice grains.液泡铁转运蛋白OsVIT2在铁向水稻籽粒分配中的作用。
New Phytol. 2021 May;230(3):1049-1062. doi: 10.1111/nph.17219. Epub 2021 Feb 12.
9
The Bio3D packages for structural bioinformatics.生物 3D 结构生物信息学包。
Protein Sci. 2021 Jan;30(1):20-30. doi: 10.1002/pro.3923. Epub 2020 Aug 17.
10
Normal Mode Analysis as a Routine Part of a Structural Investigation.正常模式分析作为结构研究的常规部分。
Molecules. 2019 Sep 10;24(18):3293. doi: 10.3390/molecules24183293.