• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

简单代谢系统的效率与设计

Efficiency and design of simple metabolic systems.

作者信息

Heinrich R, Holzhütter H G

出版信息

Biomed Biochim Acta. 1985;44(6):959-69.

PMID:4038290
Abstract

A theoretical approach to the explanation of the structural design of metabolic pathways is presented. It is based on the hypothesis that due to natural selection during evolution the cellular metabolism of present-day organisms may be characterized by optimal properties. Two cardinal terms enter the theory: 1) the efficiency of metabolic pathways and 2) the evolutionary effort for the change of the kinetic parameters of the involved enzymes by mutations of the corresponding genes. For both quantities simple mathematical expressions are proposed. By maximizing the efficiency under the constraint of a constant evolutionary effort the theory allows the calculation of the optimal parameter distribution. The theoretical concept is applied to simple metabolic systems consisting of monomolecular reactions only. It is shown that in the optimal state of the linear enzymatic chain the evolutionary effort is mainly spent on the enzymes located at the beginning of the chain. This tendency is more pronounced if the kinetic equations of the enzymes are first-order rate laws. With respect to Michaelis-Menten enzymes the optimal state is characterized by a decrease of the maximal activities and an increase of the fractional saturation of the enzymes towards the end of the chain.

摘要

本文提出了一种解释代谢途径结构设计的理论方法。该方法基于这样一种假设:由于进化过程中的自然选择,当今生物体的细胞代谢可能具有最优特性。该理论引入了两个基本概念:1)代谢途径的效率;2)通过相应基因突变改变相关酶动力学参数的进化努力。针对这两个量,提出了简单的数学表达式。通过在恒定进化努力的约束下最大化效率,该理论允许计算最优参数分布。该理论概念应用于仅由单分子反应组成的简单代谢系统。结果表明,在线性酶链的最优状态下,进化努力主要花费在位于链起始位置的酶上。如果酶的动力学方程是一级速率定律,这种趋势会更加明显。对于米氏酶,最优状态的特征是链末端酶的最大活性降低,分数饱和度增加。

相似文献

1
Efficiency and design of simple metabolic systems.简单代谢系统的效率与设计
Biomed Biochim Acta. 1985;44(6):959-69.
2
The structure of metabolic systems: a theoretical approach.代谢系统的结构:一种理论方法。
Biomed Biochim Acta. 1990;49(2-3):S154-9.
3
Evolutionary optimization of metabolic pathways. Theoretical reconstruction of the stoichiometry of ATP and NADH producing systems.代谢途径的进化优化。ATP和NADH产生系统化学计量学的理论重建。
Bull Math Biol. 2001 Jan;63(1):21-55. doi: 10.1006/bulm.2000.0197.
4
Control analysis of unbranched enzymatic chains in states of maximal activity.最大活性状态下无分支酶链的对照分析。
J Theor Biol. 1996 Oct 7;182(3):243-52. doi: 10.1006/jtbi.1996.0161.
5
A second-order approach to metabolic control analysis.代谢控制分析的二阶方法。
J Theor Biol. 1993 Sep 7;164(1):85-102. doi: 10.1006/jtbi.1993.1141.
6
[Selection criteria in metabolic systems].
Biomed Biochim Acta. 1984;43(1):47-55.
7
Kinetic and thermodynamic principles determining the structural design of ATP-producing systems.决定ATP产生系统结构设计的动力学和热力学原理。
Bull Math Biol. 1998 May;60(3):505-43. doi: 10.1006/bulm.1997.0028.
8
Evolutionary optimization of enzyme kinetic parameters; effect of constraints.酶动力学参数的进化优化;约束条件的影响
J Theor Biol. 1994 Dec 7;171(3):309-23. doi: 10.1006/jtbi.1994.1234.
9
A new approach for determination of the selectively favoured kinetic design of enzyme reactions.一种用于确定酶反应选择性偏好动力学设计的新方法。
J Theor Biol. 1996 Nov 21;183(2):179-83. doi: 10.1006/jtbi.1996.0211.
10
Combining metabolic pathway analysis with Evolutionary Game Theory: explaining the occurrence of low-yield pathways by an analytic optimization approach.将代谢途径分析与进化博弈论相结合:用解析优化方法解释低产途径的出现
Biosystems. 2011 Aug;105(2):147-53. doi: 10.1016/j.biosystems.2011.05.007. Epub 2011 May 19.

引用本文的文献

1
Genetic-algorithm selection of a regulatory structure that directs flux in a simple metabolic model.遗传算法对简单代谢模型中引导通量的调控结构的选择。
Biophys J. 1995 Oct;69(4):1321-33. doi: 10.1016/S0006-3495(95)79999-4.
2
A theoretical approach to the evolution and structural design of enzymatic networks: linear enzymatic chains, branched pathways and glycolysis of erythrocytes.酶网络进化与结构设计的理论方法:线性酶链、分支途径及红细胞糖酵解
Bull Math Biol. 1987;49(5):539-95. doi: 10.1016/s0092-8240(87)90003-6.