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氰基甲醛的全局势能面研究及其构象动力学、分解途径和涉及水的双分子反应

Global Potential Energy Surface Investigation of Cyanoformaldehyde and Its Conformational Dynamics, Decomposition Pathways, and Water-Involved Bimolecular Reactions.

作者信息

Zhang Dapeng, Kishimoto Naoki

机构信息

Department of Chemistry, Graduate School of Science, Tohoku University, 6-3, Aoba, Aramaki, Aoba-ku, Sendai 980-8578, Japan.

出版信息

ACS Omega. 2025 Apr 28;10(18):18924-18935. doi: 10.1021/acsomega.5c00949. eCollection 2025 May 13.

DOI:10.1021/acsomega.5c00949
PMID:40385158
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12079269/
Abstract

Cyanoformaldehyde [HC(O)CN], a detected interstellar molecule, exhibits potential isomeric transformations that remain incompletely understood. Understanding its conformational flexibility is crucial for predicting its reactivity in interstellar conditions. This study presents a comprehensive investigation of the complete HC(O)CN potential energy surface (PES) using the anharmonic downward distortion following (ADDF) algorithm, enabling exhaustive mapping of EQs, TSs, DCs, and connecting pathways. At the B3LYP-D3(BJ)/def2-TZVP level of theory, our analysis reveals 48 EQs, 152 TSs, and 49 DCs. We identify 80 unique isomerization pathways mediated by TS structures (EQ-TS-EQ), complemented by 34 TS-mediated (EQ-TS-DC) and 40 direct (EQ-DC) DCs. The multicomponent artificial force induced reaction (MC-AFIR) method is employed to generate stochastic conformational ensembles comprising the most stable isomers in investigations and a single water molecule, enabling systematic analysis of product formation propensities. These findings provide a comprehensive database of conformational relationships, thermodynamic behaviors, and water-involved reactions for HC(O)CN isomers. Our analysis establishes a reference framework for predicting isomer stability, interconversion pathways, and reactivity under various conditions.

摘要

氰基甲醛[HC(O)CN]是一种已被检测到的星际分子,它表现出一些尚未完全理解的潜在异构化转变。了解其构象灵活性对于预测其在星际条件下的反应性至关重要。本研究使用非谐向下扭曲跟踪(ADDF)算法对完整的HC(O)CN势能面(PES)进行了全面研究,从而能够详尽地绘制平衡态(EQs)、过渡态(TSs)、解离通道(DCs)及连接路径。在B3LYP-D3(BJ)/def2-TZVP理论水平下,我们的分析揭示了48个平衡态、152个过渡态和49个解离通道。我们确定了由过渡态结构介导的80条独特的异构化途径(EQ-TS-EQ),另外还有34条由过渡态介导的(EQ-TS-DC)和40条直接的(EQ-DC)解离通道。在研究中,采用多组分人工力诱导反应(MC-AFIR)方法生成包含最稳定异构体和单个水分子的随机构象系综,以便系统地分析产物形成倾向。这些发现为HC(O)CN异构体的构象关系、热力学行为及涉及水的反应提供了一个全面的数据库。我们的分析为预测各种条件下的异构体稳定性、相互转化途径和反应性建立了一个参考框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/57b4/12079269/f1f08fed354e/ao5c00949_0007.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/57b4/12079269/d399f23fc601/ao5c00949_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/57b4/12079269/da6f9fa2a09b/ao5c00949_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/57b4/12079269/e4f80faeb17d/ao5c00949_0003.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/57b4/12079269/f1f08fed354e/ao5c00949_0007.jpg

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本文引用的文献

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J Chem Theory Comput. 2018 Aug 14;14(8):4052-4062. doi: 10.1021/acs.jctc.8b00261. Epub 2018 Jul 12.
2
Implementation and performance of the artificial force induced reaction method in the GRRM17 program.人工力诱发反应方法在 GRRM17 程序中的实现和性能。
J Comput Chem. 2018 Feb 5;39(4):233-251. doi: 10.1002/jcc.25106. Epub 2017 Nov 14.
3
Structure and Spectroscopy of CHNO Isomers.CHNO异构体的结构与光谱学
J Phys Chem A. 2017 May 4;121(17):3263-3273. doi: 10.1021/acs.jpca.6b12609. Epub 2017 Apr 24.
4
Global exploration of isomers and isomerization channels on the quantum chemical potential energy surface of H CNO.HCNO 量子化学势能表面上异构体和异构化通道的全局探索。
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5
Study of Potential Energy Surfaces towards Global Reaction Route Mapping.
Chem Rec. 2016 Oct;16(5):2198-2218. doi: 10.1002/tcr.201500284. Epub 2016 Apr 5.
6
Finding Reaction Pathways of Type A + B → X: Toward Systematic Prediction of Reaction Mechanisms.寻找A + B → X型反应路径:迈向反应机理的系统预测
J Chem Theory Comput. 2011 Aug 9;7(8):2335-45. doi: 10.1021/ct200290m. Epub 2011 Jul 6.
7
Communication: double-hybrid functionals from adiabatic-connection: the QIDH model.通讯:基于绝热连接的双杂化泛函:QIDH模型
J Chem Phys. 2014 Jul 21;141(3):031101. doi: 10.1063/1.4890314.
8
Systematic exploration of the mechanism of chemical reactions: the global reaction route mapping (GRRM) strategy using the ADDF and AFIR methods.系统探索化学反应机制:使用 ADDF 和 AFIR 方法的全局反应路线映射 (GRRM) 策略。
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9
Effect of the damping function in dispersion corrected density functional theory.色散修正密度泛函理论中阻尼函数的作用。
J Comput Chem. 2011 May;32(7):1456-65. doi: 10.1002/jcc.21759. Epub 2011 Mar 1.
10
Communications: A systematic method for locating transition structures of A+B-->X type reactions.通讯:定位 A+B-->X 型反应过渡态结构的系统方法。
J Chem Phys. 2010 Jun 28;132(24):241102. doi: 10.1063/1.3457903.