methylMapR - 一个用于生成原核生物功能甲基化组的R包。

methylMapR-an R package to generate the functional prokaryotic methylome.

作者信息

Morrissey Christopher, Sethuraman Arun

机构信息

Department of Biology, San Diego State University, San Diego, California, USA.

Illumina Inc., San Diego, California, USA.

出版信息

Microbiol Resour Announc. 2025 Jun 12;14(6):e0124024. doi: 10.1128/mra.01240-24. Epub 2025 May 20.

DOI:10.1128/mra.01240-24

PMID:40391902

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12160477/

Abstract

Here, we present an R package called methylMapR to capture the functional methylome from long read sequencing of prokaryotic genomes using the PacBio sequencing platform. We then describe its utility by comparative analyses of the functional methylomes in three bacterial species, , and .

摘要

在此，我们展示了一个名为methylMapR的R包，用于利用PacBio测序平台从原核生物基因组的长读长测序中捕获功能性甲基化组。然后，我们通过对三种细菌物种（此处未提及具体物种名称）的功能性甲基化组进行比较分析来描述其效用。