Huang Jianjun, Gao Shuya, Liu Shunli, Liu Li
Department of Neurology, Affiliated Hospital of Youjiang Medical University for Nationalities, Youjiang Medical University for Nationalities, Baise, Guangxi, 533000, People's Republic of China.
Graduate School of Youjiang Medical University for Nationalities, Baise, Guangxi, 533000, People's Republic of China.
J Inflamm Res. 2025 May 15;18:6305-6317. doi: 10.2147/JIR.S506360. eCollection 2025.
Intracranial aneurysms (IAs), a leading cause of subarachnoid hemorrhage, rank second only to cerebral thrombosis and hypertensive intracerebral hemorrhage among cerebrovascular diseases. However, the understanding of the regulatory mechanisms associated with IAs remains limited currently.
We obtained the GSE122897 dataset and analyzed differential expression genes (DEGs) from control, Ruptured intracranial aneurysm (RIA) and Unruptured intracranial aneurysm (UIA) samples under varied conditions. The correlation and differences of immune cell types across groups were examined. TF-target genes were obtained from the hTFtarget database, five immune-related TFs were identified and their expression was normalized and validated in an IA mouse model via qRT-PCR and Western blot analysis.
1852 up-regulated and 971 down-regulated DEGs in Control vs RIA, 583 up-regulated and 389 down-regulated genes in Control vs UIA groups. Most DEGs enriched in immune response, such as circulating immunoglobulin, immunoglobulin mediated immune response and B cell mediated immunity. A TF-target regulatory network of these DEGs were predicted and suggested that TF RUNX3 has the most target genes, including SBDS, ARTN, LTA, GMFB and so on. qRT-PCR and Western blot validated the higher expression of DBP, NR3C2 and ZNF711, and lower expression of RUNX3 and ZFN711 in IA mice.
5 key TFs DBP, RUNX3, SPIB, NR3C2 and ZNF711 were found to be related to immune response and their up/down-regulated expression were observed in IA mice. As RUNX3, SPIB and NR3C2 shared common target genes, they may involved in co-regulated pathway during IA progression.
颅内动脉瘤(IAs)是蛛网膜下腔出血的主要原因,在脑血管疾病中仅次于脑血栓形成和高血压性脑出血。然而,目前对与颅内动脉瘤相关的调控机制的了解仍然有限。
我们获取了GSE122897数据集,并分析了在不同条件下对照、破裂颅内动脉瘤(RIA)和未破裂颅内动脉瘤(UIA)样本中的差异表达基因(DEGs)。检查了各组间免疫细胞类型的相关性和差异。从hTFtarget数据库中获取转录因子-靶基因,鉴定了五个免疫相关转录因子,并通过qRT-PCR和蛋白质印迹分析在颅内动脉瘤小鼠模型中对其表达进行了标准化和验证。
在对照与RIA组中,有1852个上调和971个下调的DEGs,在对照与UIA组中有583个上调和389个下调的基因。大多数DEGs富集于免疫反应,如循环免疫球蛋白、免疫球蛋白介导的免疫反应和B细胞介导的免疫。预测了这些DEGs的转录因子-靶调控网络,表明转录因子RUNX3具有最多的靶基因,包括SBDS、ARTN、LTA、GMFB等。qRT-PCR和蛋白质印迹验证了颅内动脉瘤小鼠中DBP、NR3C2和ZNF711的高表达以及RUNX3和ZFN711的低表达。
发现5个关键转录因子DBP、RUNX3、SPIB、NR3C2和ZNF711与免疫反应相关,并且在颅内动脉瘤小鼠中观察到它们的上调/下调表达。由于RUNX3、SPIB和NR3C2共享共同的靶基因,它们可能在颅内动脉瘤进展过程中参与共同调控途径。