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使用最佳预测法估计泌乳奶量时的方差缩减和测量误差:一项分析性综述

Variance reduction and measurement errors in estimating lactation milk yields using best prediction: An analytical review.

作者信息

Wu Xiao-Lin, VanRaden Paul M, Cole John, Norman H Duane

机构信息

Council on Dairy Cattle Breeding, Bowie, MD 20716.

Department of Animal and Dairy Sciences, University of Wisconsin-Madison, Madison, WI 53706.

出版信息

JDS Commun. 2024 Dec 12;6(2):231-236. doi: 10.3168/jdsc.2024-0622. eCollection 2025 Mar.

DOI:10.3168/jdsc.2024-0622
PMID:40405994
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12094053/
Abstract

Best prediction (BP) has been used in the United States to estimate unobserved daily and lactation yields from known test-day yields since 1999. This method has proven more accurate than its predecessors. However, it has 2 remarkable challenges in practice. First, BP reduces the variance of estimated yields compared with actual yields. Reduced phenotypic variance represents a concern because it can significantly underestimate genetic variations in genetic evaluations. Second, measurement errors occur in the projected lactation yields from incomplete or inaccurate test-day records. These errors can adversely affect the accuracy of lactation yield estimations and the subsequent genetic evaluations. This article provides an analytical review of BP, focusing on variance reduction and measurement errors. We demonstrate how variance reduction and measurement errors can be intrinsic to the method. Illustrative examples are presented, highlighting the practical challenges and possible solutions.

摘要

自1999年以来,最佳预测法(BP)在美国一直被用于根据已知的测定日产奶量来估算未观测到的每日和泌乳期产奶量。该方法已被证明比其前身更为准确。然而,在实际应用中它面临两个显著挑战。首先,与实际产奶量相比,BP降低了估计产奶量的方差。表型方差的降低令人担忧,因为它可能会严重低估遗传评估中的遗传变异。其次,不完整或不准确的测定日记录所预测的泌乳期产奶量会出现测量误差。这些误差会对泌乳期产奶量估计的准确性以及后续的遗传评估产生不利影响。本文对BP进行了分析性综述,重点关注方差降低和测量误差。我们展示了方差降低和测量误差如何可能是该方法固有的。文中给出了示例,突出了实际挑战和可能的解决方案。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10d3/12094053/5732fa7c176c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10d3/12094053/6aca60c930d9/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10d3/12094053/9f3cdedf1231/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10d3/12094053/5732fa7c176c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10d3/12094053/6aca60c930d9/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10d3/12094053/9f3cdedf1231/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10d3/12094053/5732fa7c176c/gr2.jpg

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本文引用的文献

1
Estimating test-day milk yields by modeling proportional daily yields: Going beyond linearity.通过模拟比例日产量来估计测试日牛奶产量:超越线性关系。
J Dairy Sci. 2023 Dec;106(12):8979-9005. doi: 10.3168/jds.2023-23479. Epub 2023 Aug 23.
2
Daily milk yield correction factors: What are they?每日产奶量校正因子:它们是什么?
JDS Commun. 2022 Dec 1;4(1):40-45. doi: 10.3168/jdsc.2022-0230. eCollection 2023 Jan.
3
Bayesian correction for covariate measurement error: A frequentist evaluation and comparison with regression calibration.
贝叶斯校正协变量测量误差:频率论评价及与回归校正的比较。
Stat Methods Med Res. 2018 Jun;27(6):1695-1708. doi: 10.1177/0962280216667764. Epub 2016 Sep 28.
4
Best prediction of yields for long lactations.长期泌乳产量的最佳预测。
J Dairy Sci. 2009 Apr;92(4):1796-810. doi: 10.3168/jds.2007-0976.
5
Major advances in genetic evaluation techniques.遗传评估技术的重大进展。
J Dairy Sci. 2006 Apr;89(4):1337-48. doi: 10.3168/jds.S0022-0302(06)72201-9.
6
Comparison of test interval and best prediction methods for estimation of lactation yield from monthly, a.m.-p.m., and trimonthly testing.比较用于根据每月、上午-下午以及每三个月一次的检测来估计泌乳量的检测间隔和最佳预测方法。
J Dairy Sci. 1999 Feb;82(2):438-44. doi: 10.3168/jds.S0022-0302(99)75250-1.
7
Lactation yields and accuracies computed from test day yields and (co)variances by best production.根据最佳生产方式下的测定日产奶量及(协)方差计算得出的泌乳量和准确性。
J Dairy Sci. 1997 Nov;80(11):3015-22. doi: 10.3168/jds.s0022-0302(97)76268-4.
8
Estimating daily yields of cows milked three times a day.估算每天挤奶三次的奶牛的日产奶量。
J Dairy Sci. 1986 Nov;69(11):2935-40. doi: 10.3168/jds.S0022-0302(86)80749-4.
9
Inclusion of partial lactations in the genetic analysis of yield traits by differential weighting of records.通过对记录进行差异加权,将部分泌乳期纳入产量性状的遗传分析。
J Dairy Sci. 1988 Jul;71(7):1873-9. doi: 10.3168/jds.S0022-0302(88)79757-X.
10
Method and effect of adjustment for heterogeneous variance.异方差调整的方法与效果
J Dairy Sci. 1991 Dec;74(12):4350-7. doi: 10.3168/jds.S0022-0302(91)78631-1.