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25年来对一座大型建筑饮用水系统中(此处原文不完整,推测可能是某种物质等)的基因组分析。

Genomic analysis of in the drinking water system of a large building over 25 years.

作者信息

Seth-Smith Helena M B, Egli Adrian, Gautsch Sylvia, Bornstein Michael M, Kulik Eva M

机构信息

Institute of Medical Microbiology, University of Zürich, Zurich, Switzerland.

Division of Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland.

出版信息

Microb Genom. 2025 May;11(5). doi: 10.1099/mgen.0.001393.

DOI:10.1099/mgen.0.001393
PMID:40408137
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12282300/
Abstract

, the causative agent of Legionnaires' disease, is often found in the plumbing systems of buildings, from where it can be transmitted to humans via inhalation or aspiration of contaminated water drops. Annual routine water sampling from the potable water system of an occupational healthcare building in Basel over 25 years was performed in accordance with national guidelines. Overall, 309 water samples were collected at 38 time points over the period of 25 years. was recovered from 120 water samples (38.8%) from 26 time points. No clinical infections were recorded during this period. Initial decontamination measures were successful for ~12 years, after which an increase in the total number of c.f.u. as well as of -positive sites was noticed in 2007. Whole genome sequencing (WGS) analysis of =123 isolates from =113 samples showed all to be sequence type 45 (sequence-based typing scheme). The isolates are closely related, with only 408 SNPs among all isolates after the bioinformatic removal of recombination events. Over the 25 years, a single lineage deriving from a recent common ancestor colonized the water system of this building. The phylogeny of isolate genomes can be interpreted as inferring good water circulation and possible recolonization from a common source after cleaning, with genome evolution and insertion/loss of large elements evident. Regular monitoring of waterlines in healthcare settings helps to identify concentrations of spp., and WGS is recommended for detailed investigation.

摘要

嗜肺军团菌是军团病的病原体,常在建筑物的管道系统中被发现,它可通过吸入或误吸受污染的水滴传播给人类。根据国家指南,对巴塞尔一座职业健康护理大楼的饮用水系统进行了为期25年的年度常规水样采集。总体而言,在25年期间的38个时间点共采集了309份水样。在26个时间点采集的120份水样(38.8%)中检测到嗜肺军团菌。在此期间未记录到临床感染病例。最初的消毒措施成功维持了约12年,之后在2007年注意到嗜肺军团菌菌落形成单位总数以及阳性位点数量增加。对来自113份样本的123株分离株进行全基因组测序(WGS)分析,结果显示所有分离株均为序列型45(基于序列的分型方案)。这些分离株密切相关,在通过生物信息学方法去除重组事件后,所有分离株之间仅有408个单核苷酸多态性。在这25年中,源自一个近期共同祖先的单一谱系定殖于该建筑物的水系统。分离株基因组的系统发育可以解释为推断出良好的水循环以及清洁后可能从共同来源重新定殖,同时明显存在基因组进化和大元件的插入/缺失。在医疗环境中定期监测水管有助于确定嗜肺军团菌的浓度,建议使用WGS进行详细调查。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e76/12282300/76fa834b776b/mgen-11-01393-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e76/12282300/36fa929f8a1a/mgen-11-01393-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e76/12282300/76fa834b776b/mgen-11-01393-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e76/12282300/36fa929f8a1a/mgen-11-01393-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e76/12282300/76fa834b776b/mgen-11-01393-g002.jpg

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