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揭开肌色菌属的面纱:通过扩增子公共数据库探索其全球分布

Myochromella unveiled: exploring its global distribution through a public database of amplicons.

作者信息

Wei Shuwei, Qi Bao, Zhang Xiaozhuo, Zhang Hui, Shi Dongfang, Wang Qi, Li Yu, Peng Zhanwu

机构信息

Engineering Research Center of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun, China.

Hefei Mycological Valley Innovation Institute, Hefei, China.

出版信息

BMC Microbiol. 2025 May 24;25(1):320. doi: 10.1186/s12866-025-04036-x.

DOI:10.1186/s12866-025-04036-x
PMID:40413396
Abstract

Myochromella mammosa, a novel species from southwestern China, is distinguished by its small, solitary or gregarious basidiomata. The pileus is clock-shaped, with distinct central mastoids, edge stripes, and a darker center that flattens upon maturation. The stipe is white, firm when young, and becomes hollow and slightly thickened at the base with age. We conducted a comprehensive analysis of publicly available ITS sequences from NCBI-GenBank and fungal amplicon sequencing data from NCBI-SRA to explore the global distribution and enumeration of recorded species of Myochromella. At a 98% sequence similarity threshold, eleven species were identified, including eight without formal designations. Myochromella's diversity is primarily Northern Hemisphere-centric and tends toward endemic distribution. Leveraging amplicon sequencing data sets enables precise species diversity assessments, enhancing field collection efficiency and providing novel insights into macrofungal species diversity.

摘要

乳房肉色孢菌(Myochromella mammosa)是一种来自中国西南部的新物种,其特点是担子果小,单生或丛生。菌盖呈钟形,有明显的中央乳头状突起、边缘条纹,且中心颜色较深,成熟时会变平。菌柄白色,幼嫩时坚实,随着年龄增长基部会中空并稍有增粗。我们对来自NCBI - GenBank的公开ITS序列以及来自NCBI - SRA的真菌扩增子测序数据进行了全面分析,以探究肉色孢菌属(Myochromella)已记录物种的全球分布和数量。在98%的序列相似性阈值下,鉴定出了11个物种,其中包括8个未正式命名的物种。肉色孢菌属的多样性主要以北半球为中心,且倾向于特有分布。利用扩增子测序数据集能够进行精确的物种多样性评估,提高野外采集效率,并为大型真菌物种多样性提供新的见解。

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本文引用的文献

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Global diversity and biogeography of potential phytopathogenic fungi in a changing world.全球变化环境下潜在植物病原真菌的多样性与生物地理学。
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Unveiling global species abundance distributions.揭示全球物种丰度分布。
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Large-Scale Integration of Amplicon Data Reveals Massive Diversity within , Mostly Originating from Saline Environments.扩增子数据的大规模整合揭示了其内部的大量多样性,其中大部分源自盐环境。
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Taxonomic and phylogenetic contributions to (Hymenochaetales, Basidiomycota): two new species from Hawaii with a key to North American species.(伞菌目,担子菌门)的分类和系统发育学贡献:来自夏威夷的两个新物种,附有北美物种的关键特征。
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Morphology and Phylogeny of Lyophylloid Mushrooms in China with Description of Four New Species.中国扇菇属真菌的形态学与系统发育研究及四个新物种的描述
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