基于WGCNA和LASSO回归的新型结肠癌衰老相关长链非编码RNA预后模型

A Prognostic Model for Senescence-Related LncRNA in a Novel Colon Adenocarcinoma Based on WGCNA and LASSO Regression.

作者信息

Huang Yichu, Min Guangtao, Wang Hongpeng, Jiang Lei

机构信息

The First School of Clinical Medicine, Lanzhou University, Lanzhou 730000, China.

Department of General Surgery, The First Hospital of Lanzhou University, Lanzhou 730000, China.

出版信息

Biomedicines. 2025 Apr 30;13(5):1088. doi: 10.3390/biomedicines13051088.

Abstract

: This study aims to develop a prognostic model based on senescence-related long non-coding RNAs (lncRNAs) to predict the prognosis of patients with colon cancer and enhance their survival rates. : Differential expression analysis and Pearson correlation were employed to identify senescence-related lncRNAs in colon cancer. A risk prognosis model was constructed using univariate Cox regression analysis and Least Absolute Shrinkage and Selection Operator (LASSO) regression analysis. The reliability of this model was validated through survival analysis, receiver operating characteristic (ROC) curves, bar charts, and calibration curves. Additionally, the relationship between the prognostic model, immune microenvironment, and drug sensitivity was explored. : A risk prognosis model comprising eight senescence-related lncRNAs (LINC02257, AL138921.1, ATP2B1-AS1, AC005332.7, AC007728.3, AC018755.4, AL390719.3, and THCAT158) was successfully established, demonstrating strong performance in predicting the overall survival rates of colon cancer patients (AUC = 0.733). A significant correlation was observed between the senescence-related lncRNA prognostic model and the tumor microenvironment, immune cell infiltration, and drug sensitivity ( < 0.05). : The senescence-related lncRNA prognostic model developed in this work can accurately forecast the prognosis of colon cancer patients, offering new insights for personalized treatment approaches in colon cancer.

摘要

本研究旨在开发一种基于衰老相关长链非编码RNA(lncRNA)的预后模型,以预测结肠癌患者的预后并提高其生存率。采用差异表达分析和Pearson相关性分析来鉴定结肠癌中衰老相关的lncRNA。使用单变量Cox回归分析和最小绝对收缩和选择算子(LASSO)回归分析构建风险预后模型。通过生存分析、受试者工作特征(ROC)曲线、柱状图和校准曲线验证了该模型的可靠性。此外,还探讨了预后模型、免疫微环境和药物敏感性之间的关系。成功建立了一个包含八个衰老相关lncRNA(LINC02257、AL138921.1、ATP2B1-AS1、AC005332.7、AC007728.

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a55b/12109385/9ace31f274b0/biomedicines-13-01088-g001.jpg

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