Luo Ting, Zhang Qianwen, Pang Siyu, Qin Yanting, Zhang Bin, Bian Xun
Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, Guilin 541006, China.
College of Life Science, Guangxi Normal University, Guilin 541006, China.
Genes (Basel). 2025 May 10;16(5):565. doi: 10.3390/genes16050565.
Lonchodidae is the largest family within the order Phasmatodea, and although many studies have been conducted on this family, the monophyly of the family has not been established. Eight mitogenomes from Lonchodidae, including the first complete mitogenomes of four genera, were sequenced and annotated to explore their features and phylogenetic relationships. The total length ranged from 15,942-18,021 bp, and the mitogenome consisted of 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes, and a control region (CR). had the highest A + T content in Lonchodidae, except for and , in which the highest A + T contents were detected in . The phylogenetic trees were reconstructed via Bayesian inference (BI) and maximum likelihood (ML) based on the PCG123 and PCG12 datasets. As the phylogenetic trees show, Necrosciinae is recognized as monophyletic, but the monophyly of Lonchodinae has not been supported. Gene deletion and rearrangement have occurred mainly in Lonchodidae and Aschiphasmatidae. The most common reason for gene rearrangements was tandem duplication random loss (TDRL), but of inverted into the CR. In addition, genes within the same family or genus share related sequences and conserved gene blocks. we expanded the mitochondrial genomic data for this family, thereby establishing a foundational dataset for future studies.
长枝竹节虫科是竹节虫目里最大的科,尽管已经对这个科进行了许多研究,但该科的单系性尚未确立。对来自长枝竹节虫科的八个线粒体基因组进行了测序和注释,其中包括四个属的首个完整线粒体基因组,以探索它们的特征和系统发育关系。总长度在15,942 - 18,021碱基对之间,线粒体基因组由13个蛋白质编码基因(PCG)、22个tRNA基因、2个rRNA基因和一个控制区(CR)组成。在长枝竹节虫科中具有最高的A + T含量,除了[具体物种1]和[具体物种2],在[具体物种3]中检测到最高的A + T含量。基于PCG123和PCG12数据集,通过贝叶斯推断(BI)和最大似然法(ML)重建了系统发育树。如系统发育树所示,Necrosciinae被认为是单系的,但Lonchodinae的单系性未得到支持。基因缺失和重排主要发生在长枝竹节虫科和Aschiphasmatidae科中。基因重排最常见的原因是串联重复随机丢失(TDRL),但[具体基因1]的[具体部分1]倒位进入了CR。此外,同一科或属内的基因共享相关序列和保守基因块。我们扩展了该科的线粒体基因组数据,从而为未来的研究建立了一个基础数据集。