Balasco Nicole, Modjtahedi Nazanine, Monti Alessandra, Ruvo Menotti, Vitagliano Luigi, Doti Nunzianna
Institute of Molecular Biology and Pathology, National Research Council (CNR), Department of Chemistry, University of Rome Sapienza, Piazzale Aldo Moro 5, 00185 Rome, Italy.
Unité Physiopathologie et Génétique du Neurone et du Muscle, UMR CNRS 5261, Inserm U1315, Université Claude Bernard Lyon 1, 69008 Lyon, France.
Molecules. 2025 May 10;30(10):2117. doi: 10.3390/molecules30102117.
The human CHCHD4 protein, which is a prototypical family member, carries a coiled-coil-helix-coiled-coil-helix motif that is stabilized by two disulfide bonds. Using its CPC sequence motif, CHCHD4 plays a key role in mitochondrial metabolism, cell survival, and response to stress conditions, controlling the mitochondrial import of diversified protein substrates that are specifically recognized through an interplay between covalent and non-covalent interactions. In the present review, we provide an updated and comprehensive analysis of CHCHD4 substrates controlled by its redox activities. A particular emphasis has been placed on the molecular and structural aspects of these partnerships. The literature survey has been integrated with the mining of structural databases reporting either experimental structures (Protein Data Bank) or structures predicted by AlphaFold, which provide protein three-dimensional models using machine learning-based approaches. In providing an updated view of the thirty-four CHCHD4 substrates that have been experimentally validated, our analyses highlight the notion that this protein can operate on a variety of structurally diversified substrates. Although in most cases, CHCHD4 plays a crucial role in the formation of disulfide bridges that stabilize helix-coil-helix motifs of its substrates, significant variations on this common theme are observed, especially for substrates that have been more recently identified.
人类CHCHD4蛋白是该典型家族成员,带有由两个二硫键稳定的卷曲螺旋-螺旋-卷曲螺旋-螺旋基序。CHCHD4利用其CPC序列基序在线粒体代谢、细胞存活及应激条件反应中发挥关键作用,通过共价和非共价相互作用之间的相互作用控制多种蛋白质底物的线粒体导入。在本综述中,我们对受其氧化还原活性控制的CHCHD4底物进行了更新且全面的分析。特别强调了这些相互作用的分子和结构方面。文献调查与结构数据库挖掘相结合,这些数据库报告了实验结构(蛋白质数据库)或由AlphaFold预测的结构,AlphaFold使用基于机器学习的方法提供蛋白质三维模型。在提供已通过实验验证的34种CHCHD4底物的最新观点时,我们的分析强调了该蛋白可作用于多种结构多样的底物这一观点。尽管在大多数情况下,CHCHD4在形成稳定其底物螺旋-卷曲螺旋基序的二硫键中起关键作用,但在这一共同主题上观察到了显著差异,特别是对于最近鉴定的底物。