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深海冷泉弯曲杆菌门:多样性、生长、代谢特征及养分产生

Deep-Sea Cold Seep Campylobacterota: Diversity, Growth, Metabolic Characteristics, and Nutrient Production.

作者信息

Yan Xiaoman, Sun Qinglei, Xu Ke, Zhuo Jintao, Sun Yuanyuan, Qian Guowei, Zhang Xin, Sun Li

机构信息

College of Life Science, Qingdao Agricultural University, Qingdao 266109, China.

CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao 266071, China.

出版信息

Microorganisms. 2025 Apr 29;13(5):1028. doi: 10.3390/microorganisms13051028.

Abstract

Deep-sea chemosynthetic ecosystems, including cold seeps and hydrothermal vents, are widely spread in global oceans. Campylobacterota are important primary producers in deep-sea hydrothermal vents and serve as a vital food source for local invertebrates. However, the nutrients that these bacteria can provide to their hosts are unclear. To date, research on Campylobacterota in cold seeps is very limited. Consequently, little is known about the biological features and ecological potential of Campylobacterota in cold seeps. In the present work, we examined the diversity, growth, metabolic characteristics, and nutrient production of Campylobacterota in a deep-sea cold seep. Over 1000 Campylobacterota ASVs, especially autotrophic and , were identified. By optimizing the culture medium, 9 and strains were isolated, including three potentially novel species. Two novel species were characterized and found to exhibit unique morphological features. These two novel strains possessed complete reverse tricarboxylic acid pathways. One novel strain, FCS5, was a psychrotolerant autotroph with denitrification and phosphorus-removing capacity. FCS5 could grow in the absence of vitamins. Consistently, metabolomics and transcriptome analyses indicated that FCS5 produced multiple vitamins, which regulated the expressions of a large number of genes associated with carbon fixation and multiple-nutrient synthesis. Besides vitamins, autotrophic Campylobacterota also produced abundant free amino acids, fatty acids (short-chain, medium, and long-chain), and proteins. This study indicates that the cold seep abounds with Campylobacterota, which are capable of providing various nutrients for the chemosynthetic ecosystem. In addition, these bacteria may have wide applications, such as in wastewater treatment and carbon emission reduction.

摘要

包括冷泉和热液喷口在内的深海化学合成生态系统广泛分布于全球海洋。弯曲杆菌门是深海热液喷口中重要的初级生产者,也是当地无脊椎动物的重要食物来源。然而,这些细菌能够为其宿主提供的营养物质尚不清楚。迄今为止,关于冷泉中弯曲杆菌门的研究非常有限。因此,人们对冷泉中弯曲杆菌门的生物学特征和生态潜力知之甚少。在本研究中,我们考察了一个深海冷泉中弯曲杆菌门的多样性、生长、代谢特征和营养物质产生情况。鉴定出了1000多个弯曲杆菌门的扩增子序列变体(ASVs),尤其是自养型的……。通过优化培养基,分离出了9株……和……菌株,包括3个潜在的新物种。对两个新物种进行了表征,发现它们具有独特的形态特征。这两个新菌株拥有完整的反向三羧酸循环途径。一个新菌株FCS5是一种耐低温自养菌,具有反硝化和除磷能力。FCS5在没有维生素的情况下也能生长。一致地,代谢组学和转录组分析表明,FCS5产生多种维生素,这些维生素调节了大量与碳固定和多种营养物质合成相关基因的表达。除了维生素,自养型弯曲杆菌门还产生了丰富的游离氨基酸、脂肪酸(短链、中链和长链)和蛋白质。本研究表明,冷泉中富含弯曲杆菌门,它们能够为化学合成生态系统提供各种营养物质。此外,这些细菌可能具有广泛的应用,例如在废水处理和碳排放减少方面。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c78/12113678/c5b3ea9e646a/microorganisms-13-01028-g001.jpg

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