Coston Taylor D, Xia Lu, Wright Shelton W, Hantrakun Viriya, Chamnan Parinya, Wongsuvan Gumphol, Phunpang Rungnapa, Dulsuk Adul, Thiansukhon Ekkachai, Shojaie Ali, Chantratita Narisara, Limmathurotsakul Direk, Gharib Sina A, West T Eoin
Division of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, University of Washington, Seattle, WA, USA.
Department of Statistics and Probability, Michigan State University, East Lansing, MI, USA.
ERJ Open Res. 2025 May 27;11(3). doi: 10.1183/23120541.00582-2024. eCollection 2025 May.
BACKGROUND: Community-acquired pneumonia (CAP) is a major public health threat globally but is understudied in regions with the highest burden. The host immune response during infection may differ based on the site of infection. We hypothesised that analysis of the plasma metabolome in patients hospitalised with suspected infection could identify host response pathways specific to CAP. METHODS: We analysed the plasma metabolomes of adults admitted to a tertiary care hospital in northeastern Thailand with suspected community-acquired infection. Multivariable linear regression was performed for differential metabolite analyses and the global test was used for pathway analysis comparing patients with CAP non-CAP infections and uninfected controls. The least absolute shrinkage and selection operator (LASSO) was used to identify a parsimonious metabolite prognostic signature that was tested on an internal validation set to predict mortality. RESULTS: 841 metabolites from 107 CAP patients and 152 non-CAP infected patients were analysed. 52 metabolites were differentially abundant between the CAP and non-CAP groups. CAP was characterised by increased metabolites involved in polyamine metabolism and decreased metabolites involved in lipid pathways. 13 pathways were differentially enriched between the CAP and non-CAP groups, consistent with individual metabolite analyses. 40 metabolites and four pathways were associated with CAP-specific mortality. A four-metabolite signature predicted 28-day mortality in CAP (area under the curve 0.79, 95% CI 0.62-0.97). CONCLUSION: In a rural tropical setting, CAP induced a distinct metabolomic state compared to non-CAP presentations of infection that may reflect the activation of select host immune responses.
背景:社区获得性肺炎(CAP)是全球主要的公共卫生威胁,但在负担最重的地区研究较少。感染期间宿主的免疫反应可能因感染部位而异。我们假设,对疑似感染住院患者的血浆代谢组进行分析,可以识别出CAP特有的宿主反应途径。 方法:我们分析了泰国东北部一家三级护理医院收治的疑似社区获得性感染成人患者的血浆代谢组。采用多变量线性回归进行差异代谢物分析,并使用全局检验进行通路分析,比较CAP患者、非CAP感染患者和未感染对照。使用最小绝对收缩和选择算子(LASSO)来识别一个简约的代谢物预后特征,并在内部验证集上进行测试以预测死亡率。 结果:分析了107例CAP患者和152例非CAP感染患者的841种代谢物。CAP组和非CAP组之间有52种代谢物丰度存在差异。CAP的特征是多胺代谢相关代谢物增加,脂质途径相关代谢物减少。CAP组和非CAP组之间有13条通路差异富集,与单个代谢物分析结果一致。40种代谢物和4条通路与CAP特异性死亡率相关。一个由四种代谢物组成的特征可预测CAP患者的28天死亡率(曲线下面积为0.79,95%可信区间为0.62 - 0.97)。 结论:在热带农村地区,与非CAP感染表现相比,CAP诱导了一种独特的代谢组学状态,这可能反映了特定宿主免疫反应的激活。
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