• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用高斯过程回归并通过部分依赖图进行可解释性分析对血红蛋白折射率进行预测建模。

Predictive modeling of hemoglobin refractive index using Gaussian process regression with interpretability through partial dependence plots.

作者信息

Alkhanani Mustfa Faisal

机构信息

Biology Department, College of Science, University of Hafr Al Batin, Hafr Al Batin, Saudi Arabia.

出版信息

PLoS One. 2025 May 30;20(5):e0324827. doi: 10.1371/journal.pone.0324827. eCollection 2025.

DOI:10.1371/journal.pone.0324827
PMID:40445878
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12124567/
Abstract

Accurately predicting the refractive index of hemoglobin across various wavelengths and concentrations is critical for advancing optical diagnostic techniques in biological and clinical applications. This study introduces a predictive model based on Gaussian Process Regression (GPR) to estimate the refractive index of hemoglobin in both oxygenated and deoxygenated states, covering wavelengths from 400 to 700 nm and concentrations ranging from 0 to 140 g/L. The GPR model effectively captures non-linear relationships, achieving high prediction accuracy with R2 values of 99.4% for the training dataset and 99.3% for the testing dataset. An independent external dataset was used to validate the model's robustness further, yielding an R2 value of 92.80%, RMSE of 0.0042, and MSE of 1.77 × 10 ⁻ ⁵, demonstrating the model's strong generalizability. To enhance interpretability, Partial Dependence Plots (PDPs) were employed to visualize the influence of wavelength and concentration on refractive index predictions, offering clear insights into hemoglobin's optical behavior. The model's ability to provide accurate and interpretable predictions has significant implications for improving the reliability of biophotonic diagnostic tools, such as optical coherence tomography and reflectance spectroscopy, in clinical settings. By combining machine learning with interpretability techniques, this study advances the understanding of hemoglobin's optical properties and sets a benchmark for predictive modeling in biomedical optics, paving the way for more precise and dependable diagnostic applications.

摘要

准确预测血红蛋白在不同波长和浓度下的折射率对于推进生物和临床应用中的光学诊断技术至关重要。本研究引入了一种基于高斯过程回归(GPR)的预测模型,用于估计氧合和脱氧状态下血红蛋白的折射率,涵盖400至700nm的波长范围和0至140g/L的浓度范围。GPR模型有效地捕捉了非线性关系,训练数据集的R2值为99.4%,测试数据集的R2值为99.3%,实现了较高的预测精度。使用一个独立的外部数据集进一步验证了模型的稳健性,得到的R2值为92.80%,均方根误差(RMSE)为0.0042,均方误差(MSE)为1.77×10⁻⁵,证明了该模型具有很强的泛化能力。为了增强可解释性,采用了偏依赖图(PDP)来可视化波长和浓度对折射率预测的影响,从而清晰地洞察血红蛋白的光学行为。该模型提供准确且可解释预测的能力对于提高生物光子诊断工具(如光学相干断层扫描和反射光谱)在临床环境中的可靠性具有重要意义。通过将机器学习与可解释性技术相结合,本研究加深了对血红蛋白光学特性的理解,并为生物医学光学中的预测建模设定了基准,为更精确和可靠的诊断应用铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/56518e73ec72/pone.0324827.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/a5d32c339df7/pone.0324827.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/afa963d010f5/pone.0324827.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/d26bae09833b/pone.0324827.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/5909539095e0/pone.0324827.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/dfab9f2ce6b4/pone.0324827.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/bc6cc9ef1539/pone.0324827.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/529811db9398/pone.0324827.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/56518e73ec72/pone.0324827.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/a5d32c339df7/pone.0324827.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/afa963d010f5/pone.0324827.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/d26bae09833b/pone.0324827.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/5909539095e0/pone.0324827.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/dfab9f2ce6b4/pone.0324827.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/bc6cc9ef1539/pone.0324827.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/529811db9398/pone.0324827.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a742/12124567/56518e73ec72/pone.0324827.g008.jpg

相似文献

1
Predictive modeling of hemoglobin refractive index using Gaussian process regression with interpretability through partial dependence plots.使用高斯过程回归并通过部分依赖图进行可解释性分析对血红蛋白折射率进行预测建模。
PLoS One. 2025 May 30;20(5):e0324827. doi: 10.1371/journal.pone.0324827. eCollection 2025.
2
Estimating the refractive index of oxygenated and deoxygenated hemoglobin using genetic algorithm - support vector regression model.使用遗传算法-支持向量回归模型估计氧合和去氧血红蛋白的折射率。
Comput Methods Programs Biomed. 2018 Sep;163:135-142. doi: 10.1016/j.cmpb.2018.05.029. Epub 2018 May 21.
3
The refractive index of human hemoglobin in the visible range.人血红蛋白在可见光谱范围内的折射率。
Phys Med Biol. 2011 Jul 7;56(13):4013-21. doi: 10.1088/0031-9155/56/13/017. Epub 2011 Jun 15.
4
Predicting of the refractive index of haemoglobin using the Hybrid GA-SVR approach.使用混合遗传算法-支持向量回归方法预测血红蛋白的折射率。
Comput Biol Med. 2018 Jul 1;98:85-92. doi: 10.1016/j.compbiomed.2018.04.024. Epub 2018 Apr 30.
5
Predicting dry matter intake in cattle at scale using gradient boosting regression techniques and Gaussian process boosting regression with Shapley additive explanation explainable artificial intelligence, MLflow, and its containerization.使用梯度提升回归技术以及带有夏普利值加法解释的高斯过程提升回归、可解释人工智能、MLflow及其容器化来大规模预测牛的干物质摄入量。
J Anim Sci. 2025 Jan 4;103. doi: 10.1093/jas/skaf041.
6
Predictive modeling and optimization in dermatology: Machine learning for skin disease classification.皮肤病学中的预测建模与优化:用于皮肤疾病分类的机器学习
Comput Biol Med. 2025 May;189:109946. doi: 10.1016/j.compbiomed.2025.109946. Epub 2025 Mar 3.
7
Enhancing diabetic foot ulcer prediction with machine learning: A focus on Localized examinations.利用机器学习增强糖尿病足溃疡预测:聚焦局部检查。
Heliyon. 2024 Sep 19;10(19):e37635. doi: 10.1016/j.heliyon.2024.e37635. eCollection 2024 Oct 15.
8
Measurement of refractive index of hemoglobin in the visible/NIR spectral range.测量可见/近红外光谱范围内的血红蛋白折射率。
J Biomed Opt. 2018 Mar;23(3):1-9. doi: 10.1117/1.JBO.23.3.035004.
9
Computational intelligence analysis on drug solubility using thermodynamics and interaction mechanism via models comparison and validation.运用热力学和相互作用机制的计算智能分析药物溶解度:通过模型比较和验证。
Sci Rep. 2024 Nov 28;14(1):29556. doi: 10.1038/s41598-024-80952-8.
10
Interpret Gaussian Process Models by Using Integrated Gradients.使用积分梯度解释高斯过程模型。
Mol Inform. 2025 Jan;44(1):e202400051. doi: 10.1002/minf.202400051. Epub 2024 Nov 26.

本文引用的文献

1
Investigating the effect of limited spectral information on NIRS-derived changes in hemoglobin and cytochrome-c-oxidase concentration with a diffusion-based model.利用基于扩散的模型研究有限光谱信息对近红外光谱法测定的血红蛋白和细胞色素c氧化酶浓度变化的影响。
Biomed Opt Express. 2024 Sep 17;15(10):5912-5931. doi: 10.1364/BOE.531775. eCollection 2024 Oct 1.
2
Power and reproducibility in the external validation of brain-phenotype predictions.脑表型预测的外部验证中的效能和可重复性。
Nat Hum Behav. 2024 Oct;8(10):2018-2033. doi: 10.1038/s41562-024-01931-7. Epub 2024 Jul 31.
3
Oxidative stress's impact on red blood cells: Unveiling implications for health and disease.
氧化应激对红细胞的影响:揭示其与健康和疾病的关系。
Medicine (Baltimore). 2024 Mar 1;103(9):e37360. doi: 10.1097/MD.0000000000037360.
4
Development of novel polymer haemoglobin based particles as an antioxidant, antibacterial and an oxygen carrier agents.开发新型聚合物血红蛋白基颗粒作为抗氧化剂、抗菌剂和氧载体。
Sci Rep. 2024 Feb 6;14(1):3031. doi: 10.1038/s41598-024-53548-5.
5
Validating the Generalizability of Ophthalmic Artificial Intelligence Models on Real-World Clinical Data.验证眼科人工智能模型在真实临床数据中的泛化能力。
Transl Vis Sci Technol. 2023 Nov 1;12(11):8. doi: 10.1167/tvst.12.11.8.
6
A Visual Analytics Conceptual Framework for Explorable and Steerable Partial Dependence Analysis.用于可探索和可控局部依赖分析的可视化分析概念框架。
IEEE Trans Vis Comput Graph. 2024 Aug;30(8):4497-4513. doi: 10.1109/TVCG.2023.3263739. Epub 2024 Jul 1.
7
Specific refraction-index increments of oxygenated hemoglobin from thalassemia-minor patients are not significantly different than those from healthy individuals.轻度地中海贫血患者的氧合血红蛋白的比折射增量与健康个体的比折射增量无显著差异。
Appl Opt. 2022 Nov 10;61(32):9334-9341. doi: 10.1364/AO.474991.
8
Refractive Index of Hemoglobin Analysis: A Comparison of Alternating Conditional Expectations and Computational Intelligence Models.血红蛋白分析的折射率:交替条件期望与计算智能模型的比较
ACS Omega. 2022 Sep 13;7(38):33769-33782. doi: 10.1021/acsomega.2c00746. eCollection 2022 Sep 27.
9
Gaussian Process Regression With Interpretable Sample-Wise Feature Weights.具有可解释样本级特征权重的高斯过程回归
IEEE Trans Neural Netw Learn Syst. 2023 Sep;34(9):5789-5803. doi: 10.1109/TNNLS.2021.3131234. Epub 2023 Sep 1.
10
The Effect of Haematocrit on Measurement of the Mid-Infrared Refractive Index of Plasma in Whole Blood.全血中血球比容对中红外血浆折光指数测量的影响。
Biosensors (Basel). 2021 Oct 25;11(11):417. doi: 10.3390/bios11110417.