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通过多重PCR和鸟枪法宏基因组学方法鉴定大眼蝽(Geocoris ochropterus (Fieber))(半翅目:大眼蝽科)的食物资源

Identification of diet resources of big-eyed bug Geocoris ochropterus (Fieber) (Hemiptera: Geocoridae) by multiplex PCR and shotgun metagenomic approaches.

作者信息

Quoc Nguyen Bao, Nhu Le Thuy To, Chau Nguyen Ngoc Bao

机构信息

Faculty of Biological Sciences, Nong Lam University, Ho Chi Minh City, Vietnam.

Department of Agricultural Biotechnology, Faculty of Biotechnology, Ho Chi Minh City Open University, Ho Chi Minh City, Vietnam.

出版信息

Mol Biol Rep. 2025 Jun 3;52(1):537. doi: 10.1007/s11033-025-10655-4.

Abstract

BACKGROUND

Big-eyed bugs (Geocoris spp.) are important generalist predators in agricultural ecosystems, playing a crucial role in natural pest control.

METHODS

To better understand their dietary sources, we assessed the plant and animal food sources in the gut of Geocoris ochropterus using multiplex PCR and shotgun metagenomic analysis. The PCR assays targeted genetic markers from both animal (COI) and plant (matK and rbcL) DNA.

RESULTS

Results revealed the presence of both animal and plant-derived DNA in the gut samples, indicating that Geocoris ochropterus feeds on a mixed diet. Additionally, the results of shotgun metagenomic sequencing of the gut microbiota showed a predominance of Eukaryota, with over 80% of sequences belonging to this domain, while a diverse range of taxonomic groups were identified, including arthropods, plants, bacteria, and fungi. Arthropods particularly insects from the orders Lepidoptera, Hemiptera, Hymenoptera, Coleoptera, Phasmatodea and plants belonging to the orders Brassicales, Cucurbitales, and Poales constituted the most abundant dietary components. At the genus level, notable taxa included Maniola (family Nymphalidae), Carposina (Carposinidae), Helicoverpa (Noctuidae), and Solanum (Solanaceae). Species-level analysis confirmed the dominance of several insect species, including Maniola hyperanthus, Carposina sasakii, and Bombyx mori, alongside plant species such as Cucumis melo, Gossypium hirsutum, and Digitaria exilis.

CONCLUSIONS

These findings provide a comprehensive characterization of the diet of Geocoris ochropterus, highlighting its role as a generalist predator with a diverse diet consisting of both insect and plant food sources. This study contributes to the understanding of Geocoris ochropterus as a potential biocontrol agent in agricultural systems.

摘要

背景

大眼蝽(Geocoris spp.)是农业生态系统中重要的多食性捕食者,在自然害虫控制中发挥着关键作用。

方法

为了更好地了解它们的食物来源,我们使用多重PCR和鸟枪法宏基因组分析评估了赭翅大眼蝽肠道中的动植物食物来源。PCR检测针对动物(COI)和植物(matK和rbcL)DNA的遗传标记。

结果

结果显示肠道样本中同时存在动物和植物来源的DNA,表明赭翅大眼蝽以混合食物为食。此外,肠道微生物群的鸟枪法宏基因组测序结果显示真核生物占主导地位,超过80%的序列属于该域,同时鉴定出了多种分类群,包括节肢动物、植物、细菌和真菌。节肢动物,特别是鳞翅目、半翅目、膜翅目、鞘翅目、竹节虫目的昆虫以及属于十字花目、葫芦目和禾本目的植物构成了最丰富的饮食成分。在属水平上,显著的分类单元包括眼蝶属(蛱蝶科)、桃小食心虫属(蛀果蛾科)、棉铃虫属(夜蛾科)和茄属(茄科)。物种水平分析证实了几种昆虫物种的优势地位,包括超眼蝶、桃小食心虫和家蚕,以及黄瓜、陆地棉和龙爪粟等植物物种。

结论

这些发现全面描述了赭翅大眼蝽的饮食特征,突出了其作为多食性捕食者的作用,其多样化的饮食包括昆虫和植物食物来源。这项研究有助于将赭翅大眼蝽理解为农业系统中的一种潜在生物防治剂。

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