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针对选择性过滤器以大幅改变一种混杂金属转运蛋白的活性和底物谱。

Targeting the selectivity filter to drastically alter the activity and substrate spectrum of a promiscuous metal transporter.

作者信息

Jiang Yuhan, Nikolovski Michael, Wang Tianqi, MacRenaris Keith, O'Halloran Thomas V, Hu Jian

机构信息

Department of Chemistry, Michigan State University, East Lansing, Michigan, USA.

Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.

出版信息

bioRxiv. 2025 May 13:2025.05.07.652779. doi: 10.1101/2025.05.07.652779.

DOI:10.1101/2025.05.07.652779
PMID:40463139
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12132181/
Abstract

-Block metal transporters play a crucial role in maintaining the homeostasis of life-essential trace elements and are attractive targets for protein engineering aimed to selectively enriching or excluding metals in living organisms. However, systematic efforts to engineer these transporters have been hindered by limited understanding of their transport mechanism and substrate specificity. In this study, we applied a focused-screen approach to human ZIP8, a promiscuous -block divalent metal transporter, by systematically changing three key residues that form the selectivity filter at the entrance of the transport pathway. Screening a library of 48 constructs using an ICP-MS-based transport assay, we identified variants with significantly altered transport activities and/or substrate preferences. The E343D variant exhibited dramatically enhanced activity for all tested metal substrates, a shift in substrate preference, and an expanded substrate spectrum including the non-substrate metals VO and Cu. Additionally, we identified lead ion (Pb) as a substrate of wild-type ZIP8. These findings suggest that the ZIP fold is highly adaptable and amenable for transporting a wide range of metals with diverse physicochemical properties, making it a promising scaffold to generate novel metal transporters for applications.

摘要

β-结构域金属转运蛋白在维持生命必需微量元素的体内平衡中起着关键作用,并且是旨在选择性地在活生物体中富集或排除金属的蛋白质工程的有吸引力的靶点。然而,由于对其转运机制和底物特异性的了解有限,对这些转运蛋白进行工程改造的系统性努力受到了阻碍。在本研究中,我们通过系统地改变在转运途径入口处形成选择性过滤器的三个关键残基,对人类ZIP8(一种混杂的β-结构域二价金属转运蛋白)应用了聚焦筛选方法。使用基于电感耦合等离子体质谱(ICP-MS)的转运测定法筛选48个构建体的文库,我们鉴定出转运活性和/或底物偏好显著改变的变体。E343D变体对所有测试的金属底物表现出显著增强的活性、底物偏好的转变以及包括非底物金属VO和Cu的扩展底物谱。此外,我们鉴定出铅离子(Pb)是野生型ZIP8的一种底物。这些发现表明,ZIP折叠具有高度的适应性,适合转运具有不同物理化学性质的多种金属,使其成为生成用于应用的新型金属转运蛋白的有前景的支架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/8ec10c514a93/nihpp-2025.05.07.652779v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/00d73041b43b/nihpp-2025.05.07.652779v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/d1f69da02de4/nihpp-2025.05.07.652779v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/b9c41f33787f/nihpp-2025.05.07.652779v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/add0b64d69da/nihpp-2025.05.07.652779v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/8ec10c514a93/nihpp-2025.05.07.652779v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/00d73041b43b/nihpp-2025.05.07.652779v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/d1f69da02de4/nihpp-2025.05.07.652779v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/b9c41f33787f/nihpp-2025.05.07.652779v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/add0b64d69da/nihpp-2025.05.07.652779v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffba/12132181/8ec10c514a93/nihpp-2025.05.07.652779v1-f0005.jpg

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