Lepore Alessia, Thédié Daniel, McLaren Lorna, Goossens Louise, Azeroglu Benura, Pambos Oliver J, Kapanidis Achillefs N, El Karoui Meriem
Institute of Cell Biology, University of Edinburgh, EH9 3FF, Edinburgh, United Kingdom.
Centre for Engineering Biology, University of Edinburgh, EH9 3BF, Edinburgh, United Kingdom.
Nucleic Acids Res. 2025 May 22;53(10). doi: 10.1093/nar/gkaf454.
Efficient DNA repair is essential for maintaining genome integrity and ensuring cell survival. In Escherichia coli, RecBCD plays a crucial role in processing DNA ends, following a DNA double-strand break (DSB), to initiate repair. While RecBCD has been extensively studied in vitro, less is known about how it contributes to rapid and efficient repair in living bacteria. Here, we use single-molecule microscopy to investigate DNA repair in real time in E. coli. We quantify RecB single-molecule mobility and monitor the induction of the DNA damage response (SOS response) in individual cells. We show that RecB binding to DNA ends caused by endogenous processes leads to efficient repair without SOS induction. In contrast, repair is less efficient in the presence of exogenous damage or in a mutant strain with modified RecB activities, leading to high SOS induction. Our findings reveal how subtle alterations in RecB activity profoundly impact the efficiency of DNA repair in E. coli.
高效的DNA修复对于维持基因组完整性和确保细胞存活至关重要。在大肠杆菌中,RecBCD在处理DNA双链断裂(DSB)后的DNA末端以启动修复过程中起着关键作用。虽然RecBCD已在体外得到广泛研究,但对于它如何在活细菌中促进快速高效的修复了解较少。在这里,我们使用单分子显微镜实时研究大肠杆菌中的DNA修复。我们量化RecB单分子的移动性,并监测单个细胞中DNA损伤反应(SOS反应)的诱导情况。我们发现,RecB与内源性过程导致的DNA末端结合可实现高效修复而无需诱导SOS反应。相比之下,在外源损伤存在的情况下或在具有改变的RecB活性的突变菌株中,修复效率较低,导致高SOS诱导。我们的研究结果揭示了RecB活性的细微变化如何深刻影响大肠杆菌中DNA修复的效率。