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ADAMTS5作为一种诊断生物标志物和潜在的肿瘤抑制因子调节乳腺癌发展,受BAIAP2-AS1、CRNDE和hsa-miR-135b-3p调控:综合系统生物学和实验方法

ADAMTS5 Modulates Breast Cancer Development as a Diagnostic Biomarker and Potential Tumour Suppressor, Regulated by BAIAP2-AS1, CRNDE and hsa-miR-135b-3p: Integrated Systems Biology and Experimental Approach.

作者信息

Tavousi Najmeh, Taqizadeh Qazal, Nasiriyan Elnaz, Tabaeian Parastoo, Rezaei Mohammad, Azadeh Mansoureh

机构信息

Zist Fanavari Novin Biotechnology Institute, Isfahan, Iran.

Student Research Committee, Isfahan University of Medical Sciences, Isfahan, Iran.

出版信息

IET Syst Biol. 2025 Jan-Dec;19(1):e70015. doi: 10.1049/syb2.70015.

Abstract

ADAMTS5, a member of the ADAMTS family, exhibits crucial biological roles, including protein shedding, proteolysis, and cell migration. Its relevance in breast cancer (BC) was explored through an integrative approach combining high-throughput analyses, database validations, and experimental confirmation. ADAMTS5 expression was significantly reduced in BC samples, as verified by microarray analysis, qRT-PCR, and public database resources. A protein-protein interaction network revealed five proteins-COL10A1, COL11A1, COMP, MMP1 and SDC1-that interact with ADAMTS5 and are primarily associated with the ECM-receptor interaction pathway. These proteins also engage in cell cycle checkpoint signalling, emphasising their potential role in tumour progression. Survival analysis of BC samples identified a novel prognostic signature based on ADAMTS5-related proteins. The study extended to coding and noncoding RNA interactions, identifying lncRNAs as key regulators. CRNDE acts as a ceRNA for ADAMTS5, modulating its expression via hsa-miR-135b-3p. Meanwhile, BAIAP2-AS1 interacts directly with ADAMTS5, offering another layer of regulatory control and prognostic value. These findings position ADAMTS5 as a vital player in BC biology, with its low expression linked to critical pathways and survival outcomes. The identified lncRNA-mediated regulatory mechanisms add depth to understanding ADAMTS5's role and suggest potential targets for therapeutic development. This study underscores ADAMTS5's potential as a biomarker and its broader implications in unravelling BC molecular mechanisms.

摘要

ADAMTS5是ADAMTS家族的成员之一,具有关键的生物学作用,包括蛋白脱落、蛋白水解和细胞迁移。通过结合高通量分析、数据库验证和实验确认的综合方法,探索了其在乳腺癌(BC)中的相关性。经微阵列分析、qRT-PCR和公共数据库资源验证,BC样本中ADAMTS5的表达显著降低。蛋白质-蛋白质相互作用网络揭示了与ADAMTS5相互作用且主要与细胞外基质-受体相互作用途径相关的五种蛋白质——COL10A1、COL11A1、COMP、MMP1和SDC1。这些蛋白质还参与细胞周期检查点信号传导,强调了它们在肿瘤进展中的潜在作用。对BC样本的生存分析基于ADAMTS5相关蛋白确定了一种新的预后特征。该研究扩展到编码和非编码RNA相互作用,确定lncRNA为关键调节因子。CRNDE作为ADAMTS5的竞争性内源RNA,通过hsa-miR-135b-3p调节其表达。同时,BAIAP2-AS1直接与ADAMTS5相互作用,提供了另一层调控和预后价值。这些发现表明ADAMTS5是BC生物学中的重要参与者,其低表达与关键途径和生存结果相关。所确定的lncRNA介导的调控机制加深了对ADAMTS5作用的理解,并为治疗开发提出了潜在靶点。本研究强调了ADAMTS5作为生物标志物的潜力及其在揭示BC分子机制方面的更广泛意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df68/12140660/ef119fa8e430/SYB2-19-e70015-g001.jpg

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