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苄丝肼衍生物作为PilB抑制剂的构效关系研究

Structure-activity relationship study of benserazide derivatives as PilB inhibitors.

作者信息

Quinlan Joseph E, Soleymani Ghazal, Shimozono Tori M, Yang Zhaomin, Santos Webster L

机构信息

Department of Chemistry and Virginia Tech Center for Drug Discovery, Virginia Tech Blacksburg VA 24060 USA

Department of Biological Sciences Virginia Tech Blacksburg VA 24060 USA

出版信息

RSC Adv. 2025 Jun 5;15(24):18986-18999. doi: 10.1039/d5ra02702k. eCollection 2025 Jun 4.

DOI:10.1039/d5ra02702k
PMID:40476237
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12138345/
Abstract

Antimicrobial resistance is an imminent health threat worldwide. Development of alternative treatments for drug-resistant microbes is of paramount importance. Targeting virulence factors, such as the type IV pilus construction enzyme PilB, is a strategy of treatment. Recently, we reported the discovery of a potent inhibitor of PilB, the FDA approved drug benserazide (IC = 3.68 μM). Herein, we report the structure-activity relationship profiling of benserazide analogues and identify key moieties that enable PilB inhibition. We found that bis-hydroxyl groups on the position of the aryl ring, a rigid imine, and exchange of the serine for a thiol have resulted in marked improvement in potency. Our studies identified 11c as a PilB inhibitor with an IC of 580 nM and selectivity for PilB over an unrelated ATPase, apyrase. These compounds provide the chemical tools to validate virulence factors as antibacterial mechanisms of action.

摘要

抗菌耐药性是全球迫在眉睫的健康威胁。开发针对耐药微生物的替代治疗方法至关重要。靶向毒力因子,如IV型菌毛构建酶PilB,是一种治疗策略。最近,我们报道了PilB的一种有效抑制剂的发现,即美国食品药品监督管理局(FDA)批准的药物苄丝肼(IC = 3.68 μM)。在此,我们报告苄丝肼类似物的构效关系分析,并确定能够抑制PilB的关键部分。我们发现芳环位置上的双羟基、刚性亚胺以及将丝氨酸替换为硫醇导致了效力的显著提高。我们的研究确定11c为一种PilB抑制剂,IC为580 nM,对PilB的选择性高于无关的ATP酶——腺苷三磷酸双磷酸酶。这些化合物提供了化学工具,以验证毒力因子作为抗菌作用机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/2ab934d15048/d5ra02702k-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/2dfbcc25971f/d5ra02702k-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/45752deb7ae7/d5ra02702k-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/c9186ed06fe6/d5ra02702k-s1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/7375530e997e/d5ra02702k-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/2ab934d15048/d5ra02702k-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/2dfbcc25971f/d5ra02702k-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/45752deb7ae7/d5ra02702k-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/c9186ed06fe6/d5ra02702k-s1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/7375530e997e/d5ra02702k-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b25a/12138345/2ab934d15048/d5ra02702k-f4.jpg

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本文引用的文献

1
Global burden of bacterial antimicrobial resistance 1990-2021: a systematic analysis with forecasts to 2050.全球细菌对抗菌药物耐药性的负担 1990-2021:一项系统分析及对 2050 年的预测。
Lancet. 2024 Sep 28;404(10459):1199-1226. doi: 10.1016/S0140-6736(24)01867-1. Epub 2024 Sep 16.
2
Antimicrobial Resistance: A Growing Serious Threat for Global Public Health.抗菌药物耐药性:对全球公共卫生日益严重的威胁。
Healthcare (Basel). 2023 Jul 5;11(13):1946. doi: 10.3390/healthcare11131946.
3
Pathogen-associated gene discovery workflows for novel antivirulence therapeutic development.
病原体相关基因发现工作流程用于新型抗病毒治疗药物的开发。
EBioMedicine. 2023 Feb;88:104429. doi: 10.1016/j.ebiom.2022.104429. Epub 2023 Jan 9.
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Emergent crisis of antibiotic resistance: A silent pandemic threat to 21 century.抗生素耐药性的紧急危机:21 世纪无声的大流行病威胁。
Microb Pathog. 2023 Jan;174:105923. doi: 10.1016/j.micpath.2022.105923. Epub 2022 Dec 13.
5
Anti-virulence therapeutic strategies against bacterial infections: recent advances.针对细菌感染的抗毒力治疗策略:最新进展
Germs. 2022 Jun 30;12(2):262-275. doi: 10.18683/germs.2022.1328. eCollection 2022 Jun.
6
Discovery of Two Inhibitors of the Type IV Pilus Assembly ATPase PilB as Potential Antivirulence Compounds.发现两种 IV 型菌毛组装 ATP 酶 PilB 的抑制剂作为潜在的抗毒力化合物。
Microbiol Spectr. 2022 Dec 21;10(6):e0387722. doi: 10.1128/spectrum.03877-22. Epub 2022 Nov 15.
7
Type IV Pili: dynamic bacterial nanomachines.IV 型菌毛:动态细菌纳米机器。
FEMS Microbiol Rev. 2022 Mar 3;46(2). doi: 10.1093/femsre/fuab053.
8
High-Throughput Screen for Inhibitors of the Type IV Pilus Assembly ATPase PilB.高通量筛选 IV 型菌毛装配 ATP 酶 PilB 的抑制剂。
mSphere. 2021 Mar 3;6(2):e00129-21. doi: 10.1128/mSphere.00129-21.
9
Type IV pilus retraction enables sustained bacteremia and plays a key role in the outcome of meningococcal sepsis in a humanized mouse model.IV型菌毛收缩可导致持续性菌血症,并在人源化小鼠模型中对脑膜炎球菌败血症的结果起关键作用。
PLoS Pathog. 2021 Feb 16;17(2):e1009299. doi: 10.1371/journal.ppat.1009299. eCollection 2021 Feb.
10
Drug repurposing for antivirulence therapy against opportunistic bacterial pathogens.药物重新利用用于针对机会性细菌病原体的抗毒力治疗。
Emerg Top Life Sci. 2017 Apr 21;1(1):13-22. doi: 10.1042/ETLS20160018.