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Computational modeling and dynamical analysis for B. subtilis competence genic regulation circuit with multiple time delays and external noisy regulation.

作者信息

Zhao Na, Liu Haihong, Yan Fang

机构信息

Department of Mathematics, South China University of Technology, Guangzhou 510641, P. R. China.

Department of Mathematics, Yunnan Normal University, Kunming 650500, P. R. China.

出版信息

J Bioinform Comput Biol. 2025 Apr;23(2):2550005. doi: 10.1142/S0219720025500052. Epub 2025 Jun 5.

DOI:10.1142/S0219720025500052
PMID:40494664
Abstract

Bacillus subtilis (B. subtilis), a bacterium known to enter a competent state spontaneously, has garnered significant attention due to its intricate internal regulatory mechanisms. This study proposes a six-dimensional continuous delay differential equation (DDE) model incorporating two-time delays and a stochastic model that accounts for noise, aimed at delving deeper into the dynamic behaviors of the B. subtilis competence gene regulation circuit. Our investigation reveals that time delays play a crucial role in inducing oscillatory behavior within the continuous DDE model. Analyzing the dynamics of multiple time delays proves to be more intricate than studying a single delay. Furthermore, certain parameter adjustments significantly influence the system's dynamic characteristics. The introduction of noise also triggers oscillations, with the irregular oscillation patterns closely aligning with real-world observations. Intriguingly, the effects of parameters and noise regulation undergo significant changes when time delays are jointly considered. This analysis offers a fresh perspective on understanding B. subtilis competence and provides essential theoretical support for subsequent experimental endeavors in this domain of biomathematics.

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