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基于分裂型DNA四面体介导的时空层次CRISPR级联反应,结合金@铂纳米标记物与人工智能的宫颈癌微小RNA生物检测法

Split DNA Tetrahedron-Mediated Spatiotemporal-Hierarchy CRISPR Cascade Integrated with Au@Pt Nanolabels and Artificial Intelligence for a Cervical Cancer MicroRNA Bioassay.

作者信息

Zhan Xiaohui, Jiang Yujia, Li Zhiyu, Hu Xiaoqin, Lan Fang, Ying Binwu, Wu Yao

机构信息

National Engineering Research Center for Biomaterials, Sichuan University, Chengdu 610064, People's Republic of China.

Department of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu 610041, People's Republic of China.

出版信息

ACS Nano. 2025 Jul 1;19(25):22849-22869. doi: 10.1021/acsnano.5c01376. Epub 2025 Jun 11.

Abstract

The screening and monitoring of microRNAs as cancer molecular biomarkers is clinically significant, but traditional methods lack sufficient sensitivity, accuracy, and convenience. The CRISPR-colorimetric lateral flow assay (CLFA) integration offers a promising and efficient solution; however, cumbersome preamplification and poor quantification hinder clinical adoption. In this study, we developed a one-step isothermal CRISPR-Cas cascaded sensing system that is preamplification-free. At its core is a designed and selected split DNA tetrahedron activator, employing spatiotemporal-hierarchy mechanisms to precisely bidirectionally drive the kinetics of two Cas enzymes, accelerating the activation of Cas13a while delaying the initiation of Cas12a, to achieve optimal balance. This system enables ultrasensitive, single-step, single-tube, and rapid detection of a cervical cancer relative biomarker, microRNA-21, achieving a limit of detection of 38 aM with a broad linear range. The CRISPR system is further integrated with CLFA enhanced by ultrathin platinum-protected gold nanolabels (Au@Pt, also named Au@s-Pt), along with a smartphone equipped with dual convolutional neural network models (YOLO v5 and MobileNet v3), enabling more precise, rapid quantification of target miRNA. Using this integrated platform, miRNA-21 levels in cervical cancer and precancerous samples can be accurately quantified with approximately 30 min at low cost and without the need for large, sophisticated instruments, with results showing good concordance with quantitative real-time polymerase chain reaction. This platform provides an efficient, highly sensitive, user-friendly, and quantifiable point-of-care testing solution.

摘要

将微小RNA作为癌症分子生物标志物进行筛查和监测具有临床意义,但传统方法缺乏足够的灵敏度、准确性和便利性。将CRISPR比色侧流分析(CLFA)整合提供了一种有前景且高效的解决方案;然而,繁琐的预扩增和较差的定量阻碍了其临床应用。在本研究中,我们开发了一种无需预扩增的一步等温CRISPR-Cas级联传感系统。其核心是一种设计并筛选出的分裂DNA四面体激活剂,采用时空层次机制精确地双向驱动两种Cas酶的动力学,加速Cas13a的激活,同时延迟Cas12a的启动,以实现最佳平衡。该系统能够超灵敏、一步、单管且快速地检测宫颈癌相关生物标志物微小RNA-21,检测限达到38 aM,线性范围宽。CRISPR系统进一步与由超薄铂保护的金纳米标签(Au@Pt,也称为Au@s-Pt)增强的CLFA以及配备双卷积神经网络模型(YOLO v5和MobileNet v3)的智能手机集成,能够更精确、快速地定量目标miRNA。使用这个集成平台,可以在约30分钟内低成本、无需大型精密仪器的情况下准确量化宫颈癌和癌前样本中的miRNA-21水平,结果与定量实时聚合酶链反应显示出良好的一致性。该平台提供了一种高效、高灵敏度、用户友好且可定量的即时检测解决方案。

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