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在底物定制、去溶剂化活性位点中将酶模型转化为模型酶。

Turning Enzyme Models into Model Enzymes in a Substrate-Tailored, Desolvated Active Site.

作者信息

Lakavathu Mohan, Zhao Yan

机构信息

Department of Chemistry, Iowa State University, Ames, Iowa 50011, United States.

出版信息

ACS Catal. 2025 May 12;15(11):8925-8930. doi: 10.1021/acscatal.5c01302. eCollection 2025 Jun 6.

Abstract

Once taken out of the active sites, the same functional groups used by enzymes for catalysis tend to lose their "magical" catalytic power in small-molecule enzyme models. We report a small-molecule enzyme model that activates a benzylic alcohol by a nearby amine for the nucleophilic attack of an activated ester. Only when the two groups are placed inside a substrate-tailored hydrophobic pocket can they display catalytic turnovers and even become reactive enough to hydrolyze amides catalytically near physiological conditions, a long-standing goal for synthetic protease mimics. These results suggest that the large gap between the innumerable catalytically incompetent small-molecule enzyme models made by chemists and true enzyme-like catalysts could be bridged by environmental engineering, which in this work enables a simple combination of a tertiary amine and an alcohol to replicate the catalytic properties of serine protease in hydrolyzing aryl amides with substrate specificity.

摘要

一旦从小分子酶模型的活性位点中取出,酶用于催化的相同官能团往往会失去其在小分子酶模型中的“神奇”催化能力。我们报道了一种小分子酶模型,该模型通过附近的胺激活苄醇,以进行活化酯的亲核攻击。只有当这两个基团置于底物定制的疏水口袋中时,它们才能表现出催化周转,甚至在生理条件下变得足够活泼以催化水解酰胺,这是合成蛋白酶模拟物长期以来的目标。这些结果表明,化学家制备的无数无催化活性的小分子酶模型与真正的类酶催化剂之间的巨大差距可以通过环境工程来弥合,在这项工作中,环境工程使叔胺和醇的简单组合能够复制丝氨酸蛋白酶在水解具有底物特异性的芳基酰胺时的催化特性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b1be/12150261/b5977e867d28/cs5c01302_0001.jpg

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