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利用外显子组测序鉴定常染色体显性遗传性牙釉质发育不全的新型致病基因FAM83H变异体

Identifying a Novel Causal FAM83H Variant for Autosomal Dominant Amelogenesis Imperfecta Using Exome-Sequencing.

作者信息

Kamps Rick, Martens Herm, de Koning Bart, Smeets Bert, van Geel Michel

机构信息

Department of Translational Genomics, Maastricht University, Maastricht, the Netherlands.

Department of Dermatology, Maastricht University Medical Centre+, Maastricht, the Netherlands.

出版信息

Mol Genet Genomic Med. 2025 Jun;13(6):e70108. doi: 10.1002/mgg3.70108.

DOI:10.1002/mgg3.70108
PMID:40506835
Abstract

BACKGROUND

Amelogenesis imperfecta (AI) is a rare genetic disorder causing tooth enamel defects. AI has been classified into 14 different clinical subtypes with different modes of inheritance. In this study, we performed whole-exome sequencing to identify the causative gene defect in a large Dutch family with autosomal dominant hypocalcified AI (ADHCAI).

METHODS

Whole-exome sequencing (WES) was performed on genomic DNA of the proband with AI. We focused on eight candidate genes known to be involved in inherited autosomal dominant AI. Sanger sequencing was used to confirm the selected exome candidate variant. Additionally, genotype and phenotype analyses were performed in the selected affected and non-affected individuals and compared according to previously listed literature for this candidate gene of the proband.

RESULTS

The clinical phenotype of the affected individuals showed a generalized and extensive enamel defect of all teeth. In the exome dataset of the proband, a novel nonsense variant in FAM83H, c.1055C>A p.(Ser352*) was detected, which was verified by conventional Sanger sequencing. Co-segregation analysis confirmed that the variant was present in all affected individuals and not in unaffected individuals.

CONCLUSION

A novel pathogenic, protein-truncating variant was detected in FAM83H, a gene with similar truncating variants known to be associated with ADHCAI.

摘要

背景

牙釉质发育不全(AI)是一种导致牙釉质缺陷的罕见遗传性疾病。AI已被分为14种不同的临床亚型,具有不同的遗传模式。在本研究中,我们进行了全外显子组测序,以确定一个患有常染色体显性低钙化型牙釉质发育不全(ADHCAI)的荷兰大家庭中的致病基因缺陷。

方法

对患有AI的先证者的基因组DNA进行全外显子组测序(WES)。我们聚焦于已知与遗传性常染色体显性AI相关的8个候选基因。使用桑格测序法确认所选外显子组候选变异。此外,对所选的受累和未受累个体进行基因型和表型分析,并根据先证者该候选基因的先前列出的文献进行比较。

结果

受累个体的临床表型显示所有牙齿均存在广泛性和广泛性牙釉质缺陷。在先证者的外显子组数据集中,检测到FAM83H基因中的一个新的无义变异,c.1055C>A p.(Ser352*),通过传统桑格测序法进行了验证。共分离分析证实该变异存在于所有受累个体中,而不存在于未受累个体中。

结论

在FAM83H基因中检测到一个新的致病的、蛋白质截短变异,该基因具有已知与ADHCAI相关的类似截短变异。

相似文献

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Identifying a Novel Causal FAM83H Variant for Autosomal Dominant Amelogenesis Imperfecta Using Exome-Sequencing.利用外显子组测序鉴定常染色体显性遗传性牙釉质发育不全的新型致病基因FAM83H变异体
Mol Genet Genomic Med. 2025 Jun;13(6):e70108. doi: 10.1002/mgg3.70108.
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Age-related dental phenotypes and tooth characteristics of FAM83H-associated hypocalcified amelogenesis imperfecta.与 FAM83H 相关的低钙性牙釉质不全的年龄相关牙表型和牙齿特征。
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本文引用的文献

1
Digenic inheritance accounts for phenotypic variability in amelogenesis imperfecta.双基因遗传解释了牙釉质不全的表型变异性。
Clin Genet. 2024 Mar;105(3):243-253. doi: 10.1111/cge.14449. Epub 2023 Nov 8.
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Tooth ultrastructure changes induced by a nonsense mutation in the FAM83H gene: insights into the diversity of amelogenesis imperfecta.FAM83H 基因突变导致的牙齿超微结构改变:探讨釉质不全的多样性。
Clin Oral Investig. 2023 Oct;27(10):6111-6123. doi: 10.1007/s00784-023-05228-3. Epub 2023 Aug 24.
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下一代测序为维特科普分类法提供了新的见解。
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Amelogenesis imperfecta in a Chinese family resulting from a FAM83H variation and the effect of FAM83H on the secretion of enamel matrix proteins.一个中国家庭中由FAM83H变异导致的牙釉质发育不全以及FAM83H对釉基质蛋白分泌的影响。
Clin Oral Investig. 2023 Mar;27(3):1289-1299. doi: 10.1007/s00784-022-04763-9. Epub 2022 Nov 1.
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Identification of a Novel Mutation and Management of Hypocalcified Amelogenesis Imperfecta in Early Childhood.幼儿期低钙化型牙釉质发育不全的新型突变鉴定与管理
Children (Basel). 2022 Mar 18;9(3):429. doi: 10.3390/children9030429.
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A novel FAM83H variant causes familial amelogenesis imperfecta with incomplete penetrance.一种新型 FAM83H 变异导致家族性牙本质发育不全,不完全外显。
Mol Genet Genomic Med. 2022 Apr;10(4):e1902. doi: 10.1002/mgg3.1902. Epub 2022 Feb 25.
7
Age-related dental phenotypes and tooth characteristics of FAM83H-associated hypocalcified amelogenesis imperfecta.与 FAM83H 相关的低钙性牙釉质不全的年龄相关牙表型和牙齿特征。
Oral Dis. 2022 Apr;28(3):734-744. doi: 10.1111/odi.13780. Epub 2021 Feb 4.
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and Autosomal Dominant Hypocalcified Amelogenesis Imperfecta.并常染色体显性低钙性牙本质生成不全。
J Dent Res. 2021 Mar;100(3):293-301. doi: 10.1177/0022034520962731. Epub 2020 Oct 9.
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The gain-of-function FAM83H mutation caused hypocalcification amelogenesis imperfecta in a Chinese family.功能获得性 FAM83H 突变导致一个中国家族出现低钙性牙本质发育不全。
Clin Oral Investig. 2021 May;25(5):2915-2923. doi: 10.1007/s00784-020-03609-6. Epub 2020 Oct 2.
10
Characterisation of the biochemical and cellular roles of native and pathogenic amelogenesis imperfecta mutants of FAM83H.鉴定 FAM83H 天然型和致病变异型牙釉蛋白突变体的生化和细胞功能。
Cell Signal. 2020 Aug;72:109632. doi: 10.1016/j.cellsig.2020.109632. Epub 2020 Apr 11.