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高粱B3转录因子家族的全基因组剖析确定SbLAV1是发育中的高粱籽粒淀粉生物合成的关键转录调节因子。

Genome-Wide Dissection of Sorghum B3 Transcription Factor Family Identifies SbLAV1 as a Critical Transcriptional Regulator of Starch Biosynthesis in Developing Sorghum Grains.

作者信息

Gong Xiangling, Li Jing, Yan Zheyu, Sun Anqi, Zheng Yi, Yin Min, Xiao Qianlin, Liu Zhizhai

机构信息

College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.

出版信息

Plants (Basel). 2025 Jun 3;14(11):1701. doi: 10.3390/plants14111701.

Abstract

Sorghum ( L.) is the fifth largest cereal crop in the world and widely used in the fields of food, feed, brewing, and fuel, while knowledge is mostly limited for sorghum grain development, including starch biosynthesis. B3 family transcription factors (TFs) play a crucial role in plant development, including grain development, dormancy, and storage of nutrients. In the present study, a comprehensive analysis of sorghum B3 genes was performed, and a total of 76 related genes were identified to be distributed on 10 chromosomes across the whole sorghum genome. According to the sequence features, the sorghum B3 family members were divided into four sub-families of ARF, RAV, LAV, and REM. Multiple elements, i.e., light-responsive elements, phytohormone-responsive elements, growth and development-related elements, and stress-responsive elements, were discovered to be located within the 2000 bp upstream of the translation start site. Results of expression analysis across multiple tissues suggested significantly different expression patterns of sorghum B3 genes. Further assays confirmed that , which belonged to the LAV subfamily of B3, co-expressed with 15 key starch biosynthesis-related genes (SBRGs), and the corresponding product of SbLAV1 could activate the promoter activities of multiple key SBRGs. Collectively, the integrative results of the present study indicate that B3 family members, including SbLAV1, might play critical roles in starch biosynthesis and grain development in sorghum.

摘要

高粱(L.)是世界上第五大谷类作物,广泛应用于食品、饲料、酿造和燃料等领域,然而对于高粱籽粒发育,包括淀粉生物合成的了解大多有限。B3家族转录因子在植物发育中起着关键作用,包括籽粒发育、休眠和养分储存。在本研究中,对高粱B3基因进行了全面分析,共鉴定出76个相关基因,分布在整个高粱基因组的10条染色体上。根据序列特征,高粱B3家族成员分为ARF、RAV、LAV和REM四个亚家族。在翻译起始位点上游2000 bp内发现了多种元件,即光响应元件、植物激素响应元件、生长发育相关元件和胁迫响应元件。多个组织的表达分析结果表明高粱B3基因具有显著不同的表达模式。进一步的实验证实,属于B3的LAV亚家族的 与15个关键淀粉生物合成相关基因(SBRGs)共表达,SbLAV1的相应产物可以激活多个关键SBRGs的启动子活性。总体而言,本研究的综合结果表明,包括SbLAV1在内的B3家族成员可能在高粱淀粉生物合成和籽粒发育中起关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e08a/12157820/7086818b630f/plants-14-01701-g001.jpg

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