Clessin Augustin, Joseph Julien, Lartillot Nicolas
Laboratoire de Biométrie et Biologie Evolutive, Universite Claude Bernard Lyon 1, UMR 5558, CNRS VAS, Villeurbanne F-69622, France.
Genetics. 2025 Aug 6;230(4). doi: 10.1093/genetics/iyaf111.
GC-biased gene conversion is a recombination-associated evolutionary process that biases the segregation ratio of AT:GC polymorphisms in the gametes of heterozygotes, in favor of GC alleles. This process is the major determinant of the variation in base composition across the human genome and can be the cause of a substantial burden of deleterious GC alleles. While the importance of GC-biased gene conversion in molecular evolution is increasingly recognized, the reasons for its existence and its variation in intensity between species remain largely unknown. Using simulations and semi-analytical approximations, we investigated the evolution of GC-biased gene conversion as a quantitative trait evolving by mutation, drift, and natural selection. We show that in a finite population in which most mutations are deleterious, GC-biased gene conversion is under weak stabilizing selection around a positive value that mainly depends on the intensity of the mutational bias and on the selective constraints exerted on the genome. Importantly, the levels of GC-biased gene conversion that evolve by natural selection do not minimize the load in the population and even increase it substantially in regions of high recombination rate. Therefore, even if they reduce the fitness of the population, the levels of GC-biased gene conversion currently observed in humans may, in fact, have been (weakly) positively selected.
GC 偏向性基因转换是一种与重组相关的进化过程,它会使杂合子配子中 AT:GC 多态性的分离比例产生偏差,偏向于 GC 等位基因。这一过程是人类基因组碱基组成变异的主要决定因素,并且可能是有害 GC 等位基因大量存在的原因。虽然 GC 偏向性基因转换在分子进化中的重要性日益得到认可,但其存在的原因以及在不同物种间强度变化的原因仍 largely 未知。我们通过模拟和半解析近似方法,研究了作为由突变、漂变和自然选择驱动进化的数量性状的 GC 偏向性基因转换的进化。我们表明,在一个大多数突变有害的有限种群中,GC 偏向性基因转换处于围绕一个正值的弱稳定选择之下,该正值主要取决于突变偏向的强度以及基因组所受到的选择限制。重要的是,通过自然选择进化而来的 GC 偏向性基因转换水平并不会使种群中的负荷最小化,甚至在高重组率区域会使其大幅增加。因此,即使它们降低了种群的适应性,但目前在人类中观察到的 GC 偏向性基因转换水平实际上可能已经(微弱地)受到正选择。