Tulchinsky Alexander Y, Zhao Xihan, Kipshidze Nodar, Hinson Jeremiah, Haghpanah Fardad, Klein Eili Y
One Health Trust, Washington, District of Columbia, USA.
Department of Emergency Medicine, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Open Forum Infect Dis. 2025 Jun 12;12(6):ofaf307. doi: 10.1093/ofid/ofaf307. eCollection 2025 Jun.
Predicting seasonal and emerging waves of respiratory viruses is crucial for effective public health responses. Despite significant efforts in developing coronavirus disease 2019 (COVID-19) forecast models, there remains a need for improvement in model performances.
We developed and evaluated a machine learning model to forecast COVID-19 hospitalizations by extending the Neural Basis Expansion Analysis for Time Series Forecasting (N-BEATS) architecture. Specifically, we integrated a temporal convolutional network to incorporate exogenous variables and added additional residual blocks to create a variance-forecasting network component for probabilistic predictions. We compared the performance of our model to the ensemble models from the COVID-19 Forecast Hub. Additionally, we implemented the model in a large academic medical center, applying transfer learning to adapt the model to local hospitalization data.
Our model demonstrated a 34.0% improvement in mean absolute error over the performance-weighted ensemble and 37.0% over the unweighted ensemble in predicting total US hospitalizations. Similar trends were obtained using mean absolute percent error and symmetric mean absolute percent error. In a real-world implementation, the model provided actionable forecasts for hospital leadership to optimize resource allocation and surge preparation.
The enhanced architecture significantly improves the forecasting of COVID-19 hospitalizations, particularly in anticipating peaks and resurgences. Its successful implementation in a hospital system highlights its potential for aiding decision-making and resource planning during pandemics and other respiratory disease outbreaks.
预测呼吸道病毒的季节性和新出现的疫情高峰对于有效的公共卫生应对至关重要。尽管在开发2019冠状病毒病(COVID-19)预测模型方面付出了巨大努力,但模型性能仍有改进的空间。
我们通过扩展用于时间序列预测的神经基扩展分析(N-BEATS)架构,开发并评估了一种用于预测COVID-19住院人数的机器学习模型。具体而言,我们集成了一个时间卷积网络以纳入外部变量,并添加了额外的残差块来创建一个用于概率预测的方差预测网络组件。我们将我们模型的性能与COVID-19预测中心的集成模型进行了比较。此外,我们在一家大型学术医疗中心实施了该模型,应用迁移学习使模型适用于当地的住院数据。
在预测美国住院总人数方面,我们的模型与性能加权集成模型相比,平均绝对误差降低了34.0%,与未加权集成模型相比降低了37.0%。使用平均绝对百分比误差和对称平均绝对百分比误差也得到了类似的趋势。在实际应用中,该模型为医院领导层提供了可操作的预测,以优化资源分配和激增准备。
增强后的架构显著改善了COVID-19住院人数的预测,特别是在预测高峰和复发方面。它在医院系统中的成功实施凸显了其在大流行和其他呼吸道疾病爆发期间辅助决策和资源规划的潜力。