Yao Wencong, Xu Bocheng, Wang Hao, Liu Shanling, Wang He, Mai Jingqun, Wang Xihan, Chen Xin, Zhang Zhu
Department of Medical Genetics, West China Second University Hospital, Sichuan University, Chengdu, China.
Key Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University), Ministry of Education, Chengdu, China.
Mol Genet Genomic Med. 2025 Jun;13(6):e70113. doi: 10.1002/mgg3.70113.
Paired Box 2 (PAX2, NM_000278.5) encodes paired box gene 2, one of many human homologs of the Drosophila melanogaster gene prd. PAX2-related disorder is an autosomal dominant disorder associated with renal and eye abnormalities.
In this study, both monochorionic diamniotic twins presenting bilateral renal agenesis were subjected to investigation. The pregnancy was terminated and muscular tissue of the fetus was analyzed by trio whole exome sequencing (WES). The target sequence was verified by Sanger sequencing at the genome level. In vitro Minigene model was constructed and the transcribed cDNA was subjected to Sanger sequencing to explore the splicing effect of the suspected mutation.
The synonymous mutation PAX2 c.792G>A was detected in both twins, but not in the parents or the family's firstborn. Although this mutation did not alter the amin acid sequence, minigene splice analysis confirmed that c.792G>A resulted in exon 6 skipping, leading to aberrant mRNA splicing.
PAX2 c.792G>A is the first pathogenic synonymous mutation ever documented. It has a significant impact on mRNA splicing and leads to developmental abnormalities. This case highlights the importance of clinical phenotyping as well as comprehensive genetic analysis during genetic testing, including evaluation of synonymous mutations.
配对盒基因2(PAX2,NM_000278.5)编码配对盒基因2,它是果蝇基因prd众多人类同源物之一。PAX2相关疾病是一种常染色体显性疾病,与肾脏和眼部异常有关。
在本研究中,对患有双侧肾缺如的单绒毛膜双羊膜囊双胞胎进行了调查。终止妊娠后,通过三联体全外显子组测序(WES)分析胎儿的肌肉组织。在基因组水平通过桑格测序验证目标序列。构建体外微型基因模型,对转录的cDNA进行桑格测序,以探索疑似突变的剪接效应。
在双胞胎中均检测到同义突变PAX2 c.792G>A,但在父母或家中的长子中未检测到。虽然该突变未改变氨基酸序列,但微型基因剪接分析证实c.792G>A导致外显子6跳跃,从而导致异常的mRNA剪接。
PAX2 c.792G>A是有记录以来首个致病性同义突变。它对mRNA剪接有重大影响,并导致发育异常。该病例突出了临床表型分析以及基因检测期间全面基因分析的重要性,包括对同义突变的评估。