• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

蛋白质翻译后修饰的全蛋白质组表征揭示了宿主细胞对病毒感染的反应,并确定了潜在的抗病毒药物靶点。

Proteome-wide characterization of PTMs reveals host cell responses to viral infection and identifies putative antiviral drug targets.

作者信息

Li Xiaolu, Kabza Adam, Ives Ashley N, Thiel Julianne, Waters Katrina M, Qian Wei-Jun, Sims Amy C, Zhang Tong

机构信息

Biological Sciences Division, Pacific Northwest National Laboratory, Pacific Northwest National Laboratory, Richland, WA, United States.

Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, United States.

出版信息

Front Immunol. 2025 May 30;16:1587106. doi: 10.3389/fimmu.2025.1587106. eCollection 2025.

DOI:10.3389/fimmu.2025.1587106
PMID:40519923
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12162599/
Abstract

Post-translational modifications (PTMs) are biochemical modifications that can significantly alter protein structure, function, stability, localization, and interactions with other molecules, thereby activating or inactivating intracellular processes. A growing body of research has begun to highlight the role of PTMs, including phosphorylation, ubiquitination, acetylation, and redox modifications, during virus-host interactions. Collectively, these PTMs regulate key steps in mounting the host immune response and control critical host pathways required for productive viral replication. This has led to the conception of antiviral therapeutics that focus on controlling host protein PTMs, potentially offering pathogen-agnostic treatment options and revolutionizing our capacity to prevent virus transmission. On the other hand, viruses can hijack the host cellular PTM machinery to modify viral proteins in promoting viral replication and evading immune surveillance. PTM regulation during virus-host interactions is complex and poorly mapped, and the development of effective PTM-targeted antiviral drugs will require a more comprehensive understanding of the cellular pathways essential for virus replication. In this review, we discuss the roles of PTMs in virus infection and how technological advances in mass spectrometry-based proteomics can capture systems-level PTM changes during viral infection. Additionally, we explore how such knowledge is leveraged to identify PTM-targeted candidates for developing antiviral drugs. Looking ahead, studies focusing on the discovery and functional elucidation of PTMs, either on the host or viral proteins, will not only deepen our understanding of molecular pathology but also pave the way for developing better drugs to fight emerging viruses.

摘要

翻译后修饰(PTMs)是一种生物化学修饰,可显著改变蛋白质的结构、功能、稳定性、定位以及与其他分子的相互作用,从而激活或失活细胞内过程。越来越多的研究开始强调PTMs在病毒-宿主相互作用过程中的作用,包括磷酸化、泛素化、乙酰化和氧化还原修饰。总体而言,这些PTMs调节宿主免疫反应的关键步骤,并控制病毒有效复制所需的关键宿主途径。这催生了专注于控制宿主蛋白PTMs的抗病毒疗法概念,可能提供与病原体无关的治疗选择,并彻底改变我们预防病毒传播的能力。另一方面,病毒可以劫持宿主细胞的PTM机制来修饰病毒蛋白,以促进病毒复制并逃避免疫监视。病毒-宿主相互作用过程中的PTM调节复杂且了解不足,开发有效的靶向PTM的抗病毒药物需要更全面地了解病毒复制所必需的细胞途径。在本综述中,我们讨论了PTMs在病毒感染中的作用,以及基于质谱的蛋白质组学技术进展如何捕捉病毒感染期间系统水平的PTM变化。此外,我们探讨了如何利用这些知识来识别用于开发抗病毒药物的靶向PTM的候选物。展望未来,专注于发现和阐明宿主或病毒蛋白上PTMs功能的研究,不仅将加深我们对分子病理学的理解,还将为开发更好的药物来对抗新兴病毒铺平道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/e4b1e4284feb/fimmu-16-1587106-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/386acfd169cb/fimmu-16-1587106-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/d5605af9212f/fimmu-16-1587106-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/7d711c07d18d/fimmu-16-1587106-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/b9aa45cf0e35/fimmu-16-1587106-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/e4b1e4284feb/fimmu-16-1587106-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/386acfd169cb/fimmu-16-1587106-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/d5605af9212f/fimmu-16-1587106-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/7d711c07d18d/fimmu-16-1587106-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/b9aa45cf0e35/fimmu-16-1587106-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c9f/12162599/e4b1e4284feb/fimmu-16-1587106-g005.jpg

相似文献

1
Proteome-wide characterization of PTMs reveals host cell responses to viral infection and identifies putative antiviral drug targets.蛋白质翻译后修饰的全蛋白质组表征揭示了宿主细胞对病毒感染的反应,并确定了潜在的抗病毒药物靶点。
Front Immunol. 2025 May 30;16:1587106. doi: 10.3389/fimmu.2025.1587106. eCollection 2025.
2
Adenovirus Remodeling of the Host Proteome and Host Factors Associated with Viral Genomes.腺病毒对宿主蛋白质组的重塑以及与病毒基因组相关的宿主因子
mSystems. 2021 Aug 31:e0046821. doi: 10.1128/mSystems.00468-21.
3
Towards a Universal Translator: Decoding the PTMs That Regulate Orthoflavivirus Infection.迈向通用翻译器:解读调控正黄病毒感染的翻译后修饰
Viruses. 2025 Feb 19;17(2):287. doi: 10.3390/v17020287.
4
A MicroRNA Screen Identifies the Wnt Signaling Pathway as a Regulator of the Interferon Response during Flavivirus Infection.一项微小RNA筛选确定Wnt信号通路是黄病毒感染期间干扰素反应的调节因子。
J Virol. 2017 Mar 29;91(8). doi: 10.1128/JVI.02388-16. Print 2017 Apr 15.
5
Prescription of Controlled Substances: Benefits and Risks管制药品的处方:益处与风险
6
An integrated proteomics approach identifies phosphorylation sites on viral and host proteins that regulate West Nile virus infection.一种综合蛋白质组学方法可鉴定出调节西尼罗河病毒感染的病毒蛋白和宿主蛋白上的磷酸化位点。
Cell Rep. 2025 May 27;44(5):115728. doi: 10.1016/j.celrep.2025.115728. Epub 2025 May 15.
7
UFMylation promotes orthoflavivirus infectious particle production.泛素样蛋白FMylation促进黄病毒属病毒感染性颗粒的产生。
J Virol. 2025 Jul 22;99(7):e0065425. doi: 10.1128/jvi.00654-25. Epub 2025 Jun 3.
8
A Primer on Proteomic Characterization of Intercellular Communication in a Virus Microenvironment.病毒微环境中细胞间通讯的蛋白质组学表征入门
Mol Cell Proteomics. 2025 Mar;24(3):100913. doi: 10.1016/j.mcpro.2025.100913. Epub 2025 Jan 23.
9
Leveraging AI to explore structural contexts of post-translational modifications in drug binding.利用人工智能探索药物结合中翻译后修饰的结构背景。
J Cheminform. 2025 May 4;17(1):67. doi: 10.1186/s13321-025-01019-y.
10
Systematic analysis of the effects of splicing on the diversity of post-translational modifications in protein isoforms using PTM-POSE.使用PTM-POSE对剪接对蛋白质异构体翻译后修饰多样性的影响进行系统分析。
bioRxiv. 2025 Mar 27:2024.01.10.575062. doi: 10.1101/2024.01.10.575062.

本文引用的文献

1
Targeted protein degraders of SARS-CoV-2 Mpro are more active than enzymatic inhibition alone with activity against nirmatrelvir resistant virus.严重急性呼吸综合征冠状病毒2(SARS-CoV-2)主要蛋白酶(Mpro)的靶向蛋白降解剂比单独的酶抑制更具活性,且对奈玛特韦耐药病毒具有活性。
Commun Med (Lond). 2025 Apr 26;5(1):140. doi: 10.1038/s43856-025-00863-1.
2
Integrative Multi-PTM Proteomics Reveals Dynamic Global, Redox, Phosphorylation, and Acetylation Regulation in Cytokine-Treated Pancreatic Beta Cells.整合多翻译后修饰蛋白质组学揭示细胞因子处理的胰岛β细胞中的动态全局、氧化还原、磷酸化和乙酰化调控
Mol Cell Proteomics. 2024 Dec;23(12):100881. doi: 10.1016/j.mcpro.2024.100881. Epub 2024 Nov 15.
3
mosGraphGen: a novel tool to generate multi-omics signaling graphs to facilitate integrative and interpretable graph AI model development.
mosGraphGen:一种用于生成多组学信号图以促进集成且可解释的图人工智能模型开发的新型工具。
Bioinform Adv. 2024 Oct 8;4(1):vbae151. doi: 10.1093/bioadv/vbae151. eCollection 2024.
4
Effect of HDAC9-induced deacetylation of glycolysis-related GAPDH lysine 219 on rotavirus replication in rotavirus-infected Caco-2 cells.组蛋白去乙酰化酶 9 诱导糖酵解相关 GAPDH 赖氨酸 219 去乙酰化对轮状病毒感染的 Caco-2 细胞中轮状病毒复制的影响。
Virus Genes. 2024 Dec;60(6):621-634. doi: 10.1007/s11262-024-02104-4. Epub 2024 Sep 20.
5
Automated Immunoprecipitation Workflow for Comprehensive Acetylome Analysis.全自动免疫沉淀工作流程用于全面乙酰化组分析
Methods Mol Biol. 2024;2823:173-191. doi: 10.1007/978-1-0716-3922-1_12.
6
Identifying Protein Interactions with Viral DNA Genomes during Virus Infection.鉴定病毒感染过程中病毒 DNA 基因组与蛋白质的相互作用。
Viruses. 2024 May 25;16(6):845. doi: 10.3390/v16060845.
7
CK2 phosphorylation of CMTR1 promotes RNA cap formation and influenza virus infection.CK2 对 CMTR1 的磷酸化促进 RNA 帽形成和流感病毒感染。
Cell Rep. 2024 Jul 23;43(7):114405. doi: 10.1016/j.celrep.2024.114405. Epub 2024 Jun 25.
8
Deciphering the phospho-signature induced by hepatitis B virus in primary human hepatocytes.解析乙型肝炎病毒在原代人肝细胞中诱导产生的磷酸化信号特征。
Front Microbiol. 2024 May 22;15:1415449. doi: 10.3389/fmicb.2024.1415449. eCollection 2024.
9
Graph machine learning for integrated multi-omics analysis.图机器学习在整合多组学分析中的应用。
Br J Cancer. 2024 Jul;131(2):205-211. doi: 10.1038/s41416-024-02706-7. Epub 2024 May 10.
10
Antigen-specific Fab profiling achieves molecular-resolution analysis of human autoantibody repertoires in rheumatoid arthritis.抗原特异性 Fab 谱分析实现了类风湿关节炎患者人源性自身抗体库的分子分辨率分析。
Nat Commun. 2024 Apr 10;15(1):3114. doi: 10.1038/s41467-024-47337-x.