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浮霉菌门中一种自给自足的β-甲基精氨酸生物合成途径。

A Self-Sufficient β-Methylarginine Biosynthetic Pathway in Planctomycetes.

作者信息

Lara Darwin Daniel, Zeng Bryan Tianzuo, Hai Yang

机构信息

Interdisciplinary Program in Quantitative Biosciences, University of California Santa Barbara, Santa Barbara, CA, 93106, USA.

Department of Chemistry & Biochemistry, University of California Santa Barbara, Santa Barbara, CA, 93106, USA.

出版信息

Chembiochem. 2025 Jun 16:e2500331. doi: 10.1002/cbic.202500331.

Abstract

β-Methyl amino acids (β-MAAs) enhance the bioactivity of natural products and possess intrinsic pharmacological properties as free amino acids. While the biosynthetic capacity for this class of noncanonical amino acids has been established in certain bacterial lineages such as Gammaproteobacteria and Actinomycetes, other bacterial phyla remain largely unexplored. A genome-mining-guided discovery of a novel biosynthetic gene cluster capable of producing β-methylarginine, from the phylum Planctomycetes is reported. Both in vivo and in vitro evidence indicates that Planctomycetes employ a transaminase (PlaA) and a methyltransferase (PlaB) to synthesize this β-MAA. Unlike previously described β-methylarginine biosynthetic pathways, PlaA and PlaB function as a self-sufficient enzyme cascade that operates without the need for additional keto acid and amino acid partners. These findings expand the catalytic repertoire for β-MAAs biosynthesis and establish Planctomycetes as a new source of secondary metabolites discovery.

摘要

β-甲基氨基酸(β-MAAs)可增强天然产物的生物活性,并作为游离氨基酸具有内在药理特性。虽然在某些细菌谱系(如γ-变形菌门和放线菌)中已确定了这类非经典氨基酸的生物合成能力,但其他细菌门在很大程度上仍未被探索。本文报道了通过基因组挖掘指导发现的一个来自浮霉菌门的能够产生β-甲基精氨酸的新型生物合成基因簇。体内和体外证据均表明,浮霉菌门利用一种转氨酶(PlaA)和一种甲基转移酶(PlaB)来合成这种β-MAA。与先前描述的β-甲基精氨酸生物合成途径不同,PlaA和PlaB作为一个自给自足的酶级联发挥作用,无需额外的酮酸和氨基酸伙伴。这些发现扩展了β-MAAs生物合成的催化范围,并确立浮霉菌门作为次生代谢物发现的新来源。

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Mining and unearthing hidden biosynthetic potential.挖掘和发掘隐藏的生物合成潜力。
Nat Commun. 2021 Jun 23;12(1):3864. doi: 10.1038/s41467-021-24133-5.

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