Gayen Dipak, Kumar Sunil, Barua Pragya, Lande Nilesh Vikram, Karmakar Subhasis, Dey Amit K, Gayali Saurabh, Maiti Tushar Kanti, Molla Kutubuddin Ali, Murumkar Snehal, Chakraborty Subhra, Chakraborty Niranjan
BRIC-National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, New Delhi, India.
ICAR-National Rice Research Institute, Cuttack, India.
Plant Biotechnol J. 2025 Sep;23(9):3879-3899. doi: 10.1111/pbi.70182. Epub 2025 Jun 17.
Stress-mediated regulation of energy metabolism and its relation to plant adaptation remain largely unknown. Mitochondrial redox potential is greatly influenced by stress-induced reactive oxygen species (ROS); therefore, we mapped the dehydration-induced alterations in the mitochondrial proteome of a resilient rice cultivar, Rasi, generating a proteome map representing the largest inventory of dehydration-responsive mitochondrial proteins from any plant species. Quantitative proteomic analysis led to the identification of an array of dehydration-responsive proteins (DRPs), associated with various cellular functions, conceivably impinging on the molecular mechanism of adaptation. One DRP identified in the mitochondrial proteome was yeast cadmium factor 54 (YCF54-like), also known as DUF (domain of unknown function) and hereafter referred to as OsDUF2488. We demonstrated that OsDUF2488 localises to mitochondria and preferentially interacts with peroxiredoxin, OsPrx1.1. Overexpression of OsDUF2488 in rice caused enhanced tolerance to dehydration and oxidative stress, while CRISPR/Cas9 knockout mutants of OsDUF2488 showed hypersensitivity to dehydration. Upon exposure to dehydration, OsDUF2488 could rescue mitochondrial dysfunction, contributing to increased ATP production in OsDUF2488-overexpressing rice. Coexpression of OsDUF2488 and OsPrx1.1 in yeast demonstrated a mutual effect on enhanced ROS catabolism, suggesting a cross-kingdom adaptive response of OsDUF2488. Our findings suggest that OsDUF2488 acts synergistically with OsPrx1.1 to regulate redox homeostasis and promote stress tolerance in rice.
应激介导的能量代谢调节及其与植物适应性的关系在很大程度上仍不清楚。线粒体氧化还原电位受应激诱导的活性氧(ROS)的显著影响;因此,我们绘制了耐旱水稻品种Rasi线粒体蛋白质组中脱水诱导的变化图谱,生成了一张蛋白质组图谱,该图谱代表了来自任何植物物种的脱水响应线粒体蛋白质的最大清单。定量蛋白质组学分析导致鉴定出一系列与各种细胞功能相关的脱水响应蛋白(DRPs),这些蛋白可能影响适应的分子机制。在线粒体蛋白质组中鉴定出的一个DRP是酵母镉因子54(YCF54样),也称为未知功能结构域(DUF),以下简称OsDUF2488。我们证明OsDUF2488定位于线粒体,并优先与过氧化物酶OsPrx1.1相互作用。水稻中OsDUF2488的过表达导致对脱水和氧化应激的耐受性增强,而OsDUF2488的CRISPR/Cas9敲除突变体对脱水表现出超敏性。暴露于脱水条件下时,OsDUF2488可以挽救线粒体功能障碍,有助于过表达OsDUF2488的水稻中ATP产量增加。OsDUF2488和OsPrx1.1在酵母中的共表达证明了对增强的ROS分解代谢有相互作用,表明OsDUF2488存在跨物种适应性反应。我们的研究结果表明,OsDUF2488与OsPrx1.1协同作用,调节水稻中的氧化还原稳态并促进胁迫耐受性。