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从新西兰鲑鱼中分离出的NZRLO1和NZRLO2菌株的完整基因组。

Complete genomes of strains NZRLO1 and NZRLO2 isolated from salmon in New Zealand.

作者信息

Jauregui Ruy, Hewison Timothy, Waddington Zac, Low Yee Syuen, McCulley Michelle

机构信息

Animal Health Laboratory, Biosecurity New Zealand, Ministry for Primary Industries, Upper Hutt, New Zealand.

New Zealand King Salmon, Picton, New Zealand.

出版信息

Microbiol Resour Announc. 2025 Jul 10;14(7):e0033925. doi: 10.1128/mra.00339-25. Epub 2025 Jun 18.

DOI:10.1128/mra.00339-25
PMID:40530775
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12243571/
Abstract

We report the complete genomes and plasmids of the Rickettsia-like bacterial isolates NZRLO1 and NZRLO2 from Chinook salmons () in New Zealand.

摘要

我们报告了从新西兰奇努克鲑鱼（）中分离出的类立克次氏体细菌NZRLO1和NZRLO2的完整基因组和质粒。

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本文引用的文献

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New Zealand rickettsia-like organism and Tenacibaculum maritimum vaccine efficacy study.新西兰立克次氏体样微生物与海生黄杆菌疫苗效力研究
J Fish Dis. 2024 Feb;47(2):e13883. doi: 10.1111/jfd.13883. Epub 2023 Nov 17.
2
BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes.BUSCO 更新：用于真核生物、原核生物和病毒基因组评分的新颖且简化的工作流程以及更广泛和更深的系统发育覆盖范围。
Mol Biol Evol. 2021 Sep 27;38(10):4647-4654. doi: 10.1093/molbev/msab199.
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RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation.RefSeq：通过蛋白质家族模型编纂扩展原核生物基因组注释管道的覆盖范围。
Nucleic Acids Res. 2021 Jan 8;49(D1):D1020-D1028. doi: 10.1093/nar/gkaa1105.
4
Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
Nat Biotechnol. 2019 May;37(5):540-546. doi: 10.1038/s41587-019-0072-8. Epub 2019 Apr 1.
5
New Zealand rickettsia-like organism (NZ-RLO) and Tenacibaculum maritimum: Distribution and phylogeny in farmed Chinook salmon (Oncorhynchus tshawytscha).新西兰立克次氏体样生物（NZ-RLO）和海生黄杆菌：养殖大鳞大麻哈鱼（Oncorhynchus tshawytscha）中的分布与系统发育
J Fish Dis. 2019 Jan;42(1):85-95. doi: 10.1111/jfd.12909. Epub 2018 Nov 8.
6
In vivo growth and genomic characterization of rickettsia-like organisms isolated from farmed Chinook salmon (Oncorhynchus tshawytscha) in New Zealand.从新西兰养殖的奇努克鲑鱼（Oncorhynchus tshawytscha）中分离出的立克次氏体样生物体的体内生长和基因组特征分析
J Fish Dis. 2018 May 28. doi: 10.1111/jfd.12817.
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Vaccines for piscirickettsiosis (salmonid rickettsial septicaemia, SRS): the Chile perspective.鱼类立克次氏体病（鲑鱼立克次氏体败血症，SRS）疫苗：智利视角。
Expert Rev Vaccines. 2017 Mar;16(3):215-228. doi: 10.1080/14760584.2017.1244483. Epub 2016 Oct 12.
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Piscirickettsiosis and Piscirickettsia salmonis in fish: a review.鱼类中的传染性造血器官坏死病和鲑鱼传染性造血器官坏死病：综述。
J Fish Dis. 2014 Mar;37(3):163-88. doi: 10.1111/jfd.12211. Epub 2013 Nov 26.